DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and irak4

DIOPT Version :9

Sequence 1:NP_001263008.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001116877.1 Gene:irak4 / 733738 XenbaseID:XB-GENE-492219 Length:457 Species:Xenopus tropicalis


Alignment Length:481 Identity:140/481 - (29%)
Similarity:220/481 - (45%) Gaps:61/481 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IRLLPLPVRAQLCAHLDALDVWQQLATAVKLYPD--------QVEQISSQKQRGRSASNEFLNIW 90
            :|.|...:..||...||..:.|:::|..: :.|.        .:.:.....|.|:|.:.|.|..|
 Frog    11 VRNLSHGMHRQLADLLDPQEGWKKIAVNI-MKPSGDARYSQFHIRRFEGTVQMGKSPTCELLYDW 74

  Fly    91 GGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYIPRSVPTISELRAAPDSSAKVNNGPPF 155
             |..|.|||.|..|.:|.....|..|:           :|............|.|||  .|.|..
 Frog    75 -GTTNCTVQDLKDLLQKNGFSAAASLL-----------LPAKNTENVNASTRPVSSA--INAPCE 125

  Fly   156 PSSSGVSNSNNNRTSTTATEEIPSLESLGNIHISTVQRAAESLLEIDYAELENATDGW------S 214
            .|::.|.::.|..|..:...|...::...::.|.          ...:.|::.:|:.:      .
 Frog   126 MSAAEVIDTCNPHTYQSKGPEENEVDDFDDMGIG----------RFSFTEVKQSTNNFDIRPVSE 180

  Fly   215 PDNRLGQGGFGDVYRGKWKQLDVAIKVMNYRSPNIDQKMVELQ-QSYNELKYLNSIRHDNILALY 278
            ..|:||:||||.|::|:.|:..||:|.:   :..:|..:.:|. |...|:|.:...:|:|::.|.
 Frog   181 GGNKLGEGGFGVVFKGEIKEKIVAVKKL---TELVDASIQDLTCQFEQEIKIMGKCQHENLVKLL 242

  Fly   279 GYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLI 343
            |||..|.:.||:|..|..|||..||   ...|..|.::|..|.:|:.|||.||.:||.   ...:
 Frog   243 GYSKDGDQYCLIYTYMPNGSLLDRL---ACLNDTPPISWVLRCNIAYGTANGINYLHE---NSHV 301

  Fly   344 HGDIKPANILLDQCLQPKIGDFGLVR-EGPKSLDAVVEVNKVFGTKIYLPPE-FRNFRQLSTGVD 406
            |.|||.||||||..|.|||.||||.| .|..|...:.|  ::.||..|:.|| .|.  :::...|
 Frog   302 HRDIKSANILLDDTLVPKISDFGLSRATGQFSKTMMTE--RIVGTTAYMAPEALRG--EITIKSD 362

  Fly   407 VYSFGIVLLEVFTGRQVTDRVPENETKKNLLDYVKQQWRQNRMELLEKHLAAPMGK-ELDMCMCA 470
            ::|||:||||:.:|....|   ||.:...||| :|::..:.. :.:|::....||. |.:.....
 Frog   363 IFSFGVVLLEIISGLAPVD---ENRSPSLLLD-IKEEIEEEE-KTIEEYTDKKMGDVEPNTLKKM 422

  Fly   471 IEAGLHCTALDPQDRPSMNAVLKRFE 496
            ......|.......||.:..||:..|
 Frog   423 YTVASQCLNQMKNRRPVITRVLQNLE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_001263008.1 Death_Pelle 32..128 CDD:260021 25/101 (25%)
STKc_IRAK 219..498 CDD:270968 99/282 (35%)
TyrKc 219..495 CDD:197581 98/279 (35%)
irak4NP_001116877.1 Death_IRAK4 9..108 CDD:260060 26/109 (24%)
STKc_IRAK4 163..450 CDD:271060 102/304 (34%)
Pkinase 184..445 CDD:278497 97/278 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181682at33208
OrthoFinder 1 1.000 - - FOG0000861
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3098
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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