DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pll and Haspin

DIOPT Version :10

Sequence 1:NP_476971.1 Gene:pll / 43283 FlyBaseID:FBgn0010441 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001015349.2 Gene:Haspin / 3355064 FlyBaseID:FBgn0046706 Length:566 Species:Drosophila melanogaster


Alignment Length:249 Identity:47/249 - (18%)
Similarity:87/249 - (34%) Gaps:88/249 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 DARYMALILETVLEWEEFQIGSCQVFVD--YRGCTVGHFDKWSTSE-------------LKIMMD 200
            |:|.....:::|||.:.:::    ||.|  .:.|...|..:...||             ....:.
  Fly   322 DSRKFKATIKSVLENQMYEV----VFDDGFAKICKSTHISRIKRSEDAKGDGPEREVVGAATDVG 382

  Fly   201 VFSRSYPLRYGE-----------IHGAKLPKQAVPIIETFLSFANPKLREK-------INCYPTI 247
            |..::.|:.:||           ::..::| |.|.:.|.      |::.:.       :|.||..
  Fly   383 VTVKTEPVEHGEGGEAAVESLVSLNQLRIP-QVVKLSEL------PEIPQNGEWCCHWMNDYPVG 440

  Fly   248 EELE-----KRLEPACKP----------------TTYGGTVDFEELNRSFRKRIEEQREIVLGLD 291
            |..|     .|:.....|                ||| |.:|...::.| .|.:..::|:...|.
  Fly   441 ESSEVDLPGGRVYTVIVPDWRMPEGWVKHIFQRITTY-GKMDILLISPS-GKVLRSRQEVKAYLA 503

  Fly   292 GMAIDVD-------------------HYTSVWDAEEVLPEAAAAGTMLE-QLNI 325
            .:..:.|                   |||..: .:..||:.|....:|. ::||
  Fly   504 EIGEEYDPNRYDFGLHVKRAKQLGFCHYTQEY-RDSFLPKPATEPVLLNTEVNI 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pllNP_476971.1 Death_Pelle 32..128 CDD:260021
STKc_IRAK 219..498 CDD:270968 31/155 (20%)
HaspinNP_001015349.2 Protein Kinases, catalytic domain 225..547 CDD:473864 44/238 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.