DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5984 and GEX2

DIOPT Version :10

Sequence 1:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001330856.1 Gene:GEX2 / 834974 AraportID:AT5G49150 Length:1087 Species:Arabidopsis thaliana


Alignment Length:298 Identity:52/298 - (17%)
Similarity:90/298 - (30%) Gaps:125/298 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGSGLEGNSPEEGGIFGRYQRTPDADAYPSESPRVYVAPELTDAGKVQL-LHFPSGAVRVNSPLG 87
            :|||:..:...|...|..|.:  ||..|||        |...|..:|:: |...|..:     |.
plant   372 NGSGINASIAGESLGFSVYLK--DAYGYPS--------PVQVDRLQVRIVLEIDSSII-----LP 421

  Fly    88 FIIKRNGVKGNFEVRVEGPSGQPIQPVRQQQ------------------LDPERFQIDCQLDAGA 134
            .|..|..:.|.      |.|.|...|:.::.                  ..|:|          .
plant   422 TIQPREALNGT------GSSHQAATPLYEKHGGRASGNLVTQASIFDVTYTPKR----------T 470

  Fly   135 GLYKVHIKCNSVTL-PRSPFI-------------------------------IVAIAGATESIDG 167
            |:|::.|...::.| ...|||                               ::.:.|....:..
plant   471 GIYRIFISSGNIVLNGGQPFIKEVYAGEVNVAACSVTQFNGKVPKEIKNEIVVLLLDGFYNPVPS 535

  Fly   168 KPASSSVPISDSDASRVQSRGLGLTHVSLVERNEFTVDCGQAGSNMLL-VGVLGQRGPCEEVVVR 231
            :|:.....|:.::.|       ..|....|:.|:.|    ..||.:.: ||              
plant   536 QPSRLKFEITSANTS-------SFTTWEFVDNNDGT----YTGSYLAMEVG-------------- 575

  Fly   232 HLGRGIHRVTYRVCDPGDYILVVKWGEQHVPGSPFSLS 269
                     |||:|        :.:..:|:...||.::
plant   576 ---------TYRMC--------ISFDNKHIQPCPFDVN 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5984NP_651548.1 Filamin 65..154 CDD:395505 19/108 (18%)
IG_FLMN 181..271 CDD:214720 16/90 (18%)
GEX2NP_001330856.1 Filamin <539..593 CDD:395505 15/95 (16%)
tand_rpt_95 615..688 CDD:333740
Blue background indicates that the domain is not in the aligned region.

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