DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5984 and flncb

DIOPT Version :10

Sequence 1:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_009298480.1 Gene:flncb / 570288 ZFINID:ZDB-GENE-041008-175 Length:2773 Species:Danio rerio


Alignment Length:339 Identity:100/339 - (29%)
Similarity:142/339 - (41%) Gaps:118/339 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QRTPDAD-----AYPSESPRVYVAPELTDAG---------KVQL----------LHFPSGAVRV- 82
            :..||:.     |..|:..|:.....|.:.|         .|||          :|.|||||.. 
Zfish  2439 EHIPDSPFIVPIASLSDDARLLTVTSLQEMGLKVNQEASFAVQLNGARGAIDAKVHTPSGAVEEC 2503

  Fly    83 --------NSPLGFIIKRNGV-------KGN------FEVRVEGPSGQPIQP------------- 113
                    ...:.||.:.|||       .|:      |::|| |..||...|             
Zfish  2504 YITELDNDKHAIRFIPRENGVHSIDVRFNGSHIPGSPFKIRV-GEPGQAGDPGMVTAFGPGLEGG 2567

  Fly   114 ------------------VRQQQLD-PERFQIDCQ----------LDAGAGLYKVHIKCNSVTLP 149
                              .....:| |.:.::|||          .....|.|.:.||...   |
Zfish  2568 TTGVPSDFIVNTCNAGSGALSVTIDGPSKVKMDCQECPEGYKVTYTPMAPGSYLISIKYGG---P 2629

  Fly   150 R----SPF--------------------IIVAIAGATESIDGKPASSSVPISDSDASRVQSRGLG 190
            :    |||                    ::|.....:.|:.|  :.|::|...||||:|.|||.|
Zfish  2630 QHIVGSPFKAKVSGARLSGGHSLHETSSVLVETVTKSSSVAG--SFSTLPKFSSDASKVVSRGAG 2692

  Fly   191 LTHVSLVERNEFTVDCGQAGSNMLLVGVLGQRGPCEEVVVRHLGRGIHRVTYRVCDPGDYILVVK 255
            |:...:.::|.|||||.:||:|||:|||.|.:.|||||.|:|:|..::.|||.|.:.|||||:||
Zfish  2693 LSKAFIGQKNTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYNVTYTVKEKGDYILIVK 2757

  Fly   256 WGEQHVPGSPFSLS 269
            |||:.||||||.::
Zfish  2758 WGEEMVPGSPFHVT 2771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5984NP_651548.1 Filamin 65..154 CDD:395505 36/195 (18%)
IG_FLMN 181..271 CDD:214720 51/89 (57%)
flncbXP_009298480.1 CH_SF 31..155 CDD:469584
CH_SF 159..273 CDD:469584
IG_FLMN 284..380 CDD:214720
IG_FLMN 384..480 CDD:214720
IG_FLMN 524..617 CDD:214720
IG_FLMN 621..711 CDD:214720
IG_FLMN 717..811 CDD:214720
IG_FLMN 814..914 CDD:214720
IG_FLMN 917..1013 CDD:214720
IG_FLMN 1018..1105 CDD:214720
IG_FLMN 1112..1199 CDD:214720
IG_FLMN 1205..1297 CDD:214720
IG_FLMN 1301..1397 CDD:214720
IG_FLMN 1400..1487 CDD:214720
IG_FLMN 1493..1586 CDD:214720
IG_FLMN 1589..1683 CDD:214720
IG_FLMN 1709..1787 CDD:214720
IG_FLMN <1839..1903 CDD:214720
IG_FLMN 1910..1996 CDD:214720
IG_FLMN 2089..2178 CDD:214720
IG_FLMN <2295..2357 CDD:214720
IG_FLMN 2363..2451 CDD:214720 2/11 (18%)
IG_FLMN 2471..2548 CDD:214720 19/77 (25%)
IG_FLMN 2554..2644 CDD:214720 14/92 (15%)
IG_FLMN 2683..2772 CDD:214720 51/89 (57%)
Blue background indicates that the domain is not in the aligned region.

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