DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5984 and Flnc

DIOPT Version :9

Sequence 1:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_038963702.1 Gene:Flnc / 362332 RGDID:1308807 Length:2747 Species:Rattus norvegicus


Alignment Length:337 Identity:88/337 - (26%)
Similarity:137/337 - (40%) Gaps:118/337 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DAYPSESPRVYVAPELT-DAGKVQLLHFPSGAVRVNSPLGFIIKRNGVKGNFEVRVEGPSGQPIQ 112
            |.:..:||.|.....|: ||.::.:.......::||.|..|.::.||.:|..:.||..||| .::
  Rat  2411 DEHIPDSPFVVPVASLSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSG-AVE 2474

  Fly   113 PVRQQQLDPERFQIDCQLDAGAGLYKVHIKCNSVTLPRSPF------------------------ 153
            .....:||.::..|.. :....|::.:.:|.|...:|.|||                        
  Rat  2475 ECYVSELDSDKHTIRF-IPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLE 2538

  Fly   154 ------------------------------------------------------IIVAIA-GATE 163
                                                                  .::||. |..:
  Rat  2539 GGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQ 2603

  Fly   164 SIDGKP------------------------------------ASSSVPISDSDASRVQSRGLGLT 192
            .|.|.|                                    :.||:|...||||:|.:||.||:
  Rat  2604 HIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKSSSSRGASYSSIPKFSSDASKVVTRGPGLS 2668

  Fly   193 HVSLVERNEFTVDCGQAGSNMLLVGVLGQRGPCEEVVVRHLGRGIHRVTYRVCDPGDYILVVKWG 257
            ...:.::|.|||||.:||:||::|||.|.:.|||||.|:|:|..::.|||.|.:.|||||:||||
  Rat  2669 QAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWG 2733

  Fly   258 EQHVPGSPFSLS 269
            ::.||||||.::
  Rat  2734 DESVPGSPFKVN 2745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5984NP_651548.1 Filamin 65..154 CDD:279024 24/167 (14%)
Filamin 179..266 CDD:279024 48/86 (56%)
IG_FLMN 181..271 CDD:214720 48/89 (54%)
FlncXP_038963702.1 CH_FLNC_rpt1 23..147 CDD:409159
CH_FLNC_rpt2 151..265 CDD:409163
IG_FLMN 276..372 CDD:214720
IG_FLMN 376..471 CDD:214720
IG_FLMN 496..589 CDD:214720
IG_FLMN 593..683 CDD:214720
IG_FLMN 689..783 CDD:214720
IG_FLMN 786..886 CDD:214720
IG_FLMN 889..985 CDD:214720
IG_FLMN 989..1082 CDD:214720
IG_FLMN 1084..1173 CDD:214720
IG_FLMN 1177..1269 CDD:214720
IG_FLMN 1273..1369 CDD:214720
IG_FLMN 1372..1461 CDD:214720
IG_FLMN 1465..1558 CDD:214720
IG_FLMN 1561..1655 CDD:214720
IG_FLMN 1658..1754 CDD:214720
IG_FLMN <1813..1877 CDD:214720
IG_FLMN 1884..1970 CDD:214720
IG_FLMN 2063..2152 CDD:214720
IG_FLMN <2266..2330 CDD:214720
IG_FLMN 2336..2424 CDD:214720 4/12 (33%)
Filamin 2429..2515 CDD:395505 23/87 (26%)
IG_FLMN 2527..2617 CDD:214720 6/89 (7%)
IG_FLMN 2657..2746 CDD:214720 48/89 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0518
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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