DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5984 and Flnc

DIOPT Version :10

Sequence 1:NP_651548.1 Gene:CG5984 / 43281 FlyBaseID:FBgn0039500 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_038963702.1 Gene:Flnc / 362332 RGDID:1308807 Length:2747 Species:Rattus norvegicus


Alignment Length:337 Identity:88/337 - (26%)
Similarity:137/337 - (40%) Gaps:118/337 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DAYPSESPRVYVAPELT-DAGKVQLLHFPSGAVRVNSPLGFIIKRNGVKGNFEVRVEGPSGQPIQ 112
            |.:..:||.|.....|: ||.::.:.......::||.|..|.::.||.:|..:.||..||| .::
  Rat  2411 DEHIPDSPFVVPVASLSDDARRLTVTSLQETGLKVNQPASFAVQLNGARGVIDARVHTPSG-AVE 2474

  Fly   113 PVRQQQLDPERFQIDCQLDAGAGLYKVHIKCNSVTLPRSPF------------------------ 153
            .....:||.::..|.. :....|::.:.:|.|...:|.|||                        
  Rat  2475 ECYVSELDSDKHTIRF-IPHENGVHSIDVKFNGAHIPGSPFKIRVGEQSQAGDPGLVSAYGPGLE 2538

  Fly   154 ------------------------------------------------------IIVAIA-GATE 163
                                                                  .::||. |..:
  Rat  2539 GGTTGVSSEFIVNTQNAGSGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGGPQ 2603

  Fly   164 SIDGKP------------------------------------ASSSVPISDSDASRVQSRGLGLT 192
            .|.|.|                                    :.||:|...||||:|.:||.||:
  Rat  2604 HIVGSPFKAKVTGPRLSGGHSLHETSTVLVETVTKSSSSRGASYSSIPKFSSDASKVVTRGPGLS 2668

  Fly   193 HVSLVERNEFTVDCGQAGSNMLLVGVLGQRGPCEEVVVRHLGRGIHRVTYRVCDPGDYILVVKWG 257
            ...:.::|.|||||.:||:||::|||.|.:.|||||.|:|:|..::.|||.|.:.|||||:||||
  Rat  2669 QAFVGQKNSFTVDCSKAGTNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWG 2733

  Fly   258 EQHVPGSPFSLS 269
            ::.||||||.::
  Rat  2734 DESVPGSPFKVN 2745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5984NP_651548.1 Filamin 65..154 CDD:395505 24/167 (14%)
IG_FLMN 181..271 CDD:214720 48/89 (54%)
FlncXP_038963702.1 CH_FLNC_rpt1 23..147 CDD:409159
CH_FLNC_rpt2 151..265 CDD:409163
IG_FLMN 276..372 CDD:214720
IG_FLMN 376..471 CDD:214720
IG_FLMN 496..589 CDD:214720
IG_FLMN 593..683 CDD:214720
IG_FLMN 689..783 CDD:214720
IG_FLMN 786..886 CDD:214720
IG_FLMN 889..985 CDD:214720
IG_FLMN 989..1082 CDD:214720
IG_FLMN 1084..1173 CDD:214720
IG_FLMN 1177..1269 CDD:214720
IG_FLMN 1273..1369 CDD:214720
IG_FLMN 1372..1461 CDD:214720
IG_FLMN 1465..1558 CDD:214720
IG_FLMN 1561..1655 CDD:214720
IG_FLMN 1658..1754 CDD:214720
IG_FLMN <1813..1877 CDD:214720
IG_FLMN 1884..1970 CDD:214720
IG_FLMN 2063..2152 CDD:214720
IG_FLMN <2266..2330 CDD:214720
IG_FLMN 2336..2424 CDD:214720 4/12 (33%)
Filamin 2429..2515 CDD:395505 23/87 (26%)
IG_FLMN 2527..2617 CDD:214720 6/89 (7%)
IG_FLMN 2657..2746 CDD:214720 48/89 (54%)
Blue background indicates that the domain is not in the aligned region.

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