DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and AT1G50440

DIOPT Version :9

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001117462.1 Gene:AT1G50440 / 841466 AraportID:AT1G50440 Length:250 Species:Arabidopsis thaliana


Alignment Length:166 Identity:36/166 - (21%)
Similarity:66/166 - (39%) Gaps:26/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKWVHQSCISLWIDEKTRINNNLQAVSCPQC 78
            ||..:    |.||.    :.|.:..:.||.|:||.|.||:||:..|...|    .......|.:|
plant    59 GDQPQ----CRICL----DVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTK----EGFAFSHCTEC 111

  Fly    79 QTEY----TIAYPNLWI---FDRALELTNDLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQIT 136
            :..:    .:.....|:   |...:...:..|..::...:|.:..:|:.::      .:...::.
plant   112 RAFFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFY------GEELREMF 170

  Fly   137 GQEGHVHQIIQSGDLLVVLVGFPL-ISVVLILGRLI 171
            |.|.|.:.......|.:||||... ..:.:|.|:.|
plant   171 GYEEHPYGFYTLAVLAIVLVGLLYGFFIAIICGQKI 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RINGv 22..79 CDD:128983 17/56 (30%)
AT1G50440NP_001117462.1 RING_CH-C4HC3_MARCH 64..112 CDD:319409 17/55 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 47 1.000 Domainoid score I4521
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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