DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and AT1G50440

DIOPT Version :10

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_564569.1 Gene:AT1G50440 / 841466 AraportID:AT1G50440 Length:250 Species:Arabidopsis thaliana


Alignment Length:166 Identity:36/166 - (21%)
Similarity:66/166 - (39%) Gaps:26/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GDSTELERCCWICFETDKEAGRQAWVNPCLCRGTNKWVHQSCISLWIDEKTRINNNLQAVSCPQC 78
            ||..:    |.||.    :.|.:..:.||.|:||.|.||:||:..|...|    .......|.:|
plant    59 GDQPQ----CRICL----DVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTK----EGFAFSHCTEC 111

  Fly    79 QTEY----TIAYPNLWI---FDRALELTNDLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQIT 136
            :..:    .:.....|:   |...:...:..|..::...:|.:..:|:.::      .:...::.
plant   112 RAFFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFY------GEELREMF 170

  Fly   137 GQEGHVHQIIQSGDLLVVLVGFPL-ISVVLILGRLI 171
            |.|.|.:.......|.:||||... ..:.:|.|:.|
plant   171 GYEEHPYGFYTLAVLAIVLVGLLYGFFIAIICGQKI 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 18/60 (30%)
AT1G50440NP_564569.1 RING_CH-C4HC3_MARCH 64..112 CDD:438158 17/55 (31%)

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