DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and AT1G11020

DIOPT Version :10

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_563883.1 Gene:AT1G11020 / 837644 AraportID:AT1G11020 Length:321 Species:Arabidopsis thaliana


Alignment Length:142 Identity:36/142 - (25%)
Similarity:62/142 - (43%) Gaps:29/142 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SNVAAPQASA--GGDSTELER------------CCWICFETDKEAGRQAWVNPCLCRGTNKWVHQ 53
            |:.|:|.|::  .|:|.|::.            ||.||.|.|.|......::||:|:||.::||:
plant    29 SSSASPSAASVVAGNSDEIKAEEDLENDASSAPCCRICLEDDSELLGDELISPCMCKGTQQFVHR 93

  Fly    54 SCISLWIDEKTRINNNLQAVSCPQCQTEYTIAYP-----NLWIFDRALEL--TNDLILTNLYNCL 111
            ||:..|    ..:........|..|:.::.:...     |.|.......|  ..|::|  ::..:
plant    94 SCLDHW----RSVKEGFAFSHCTTCKAQFHLRVEPFEDNNSWRRKAKFRLFVARDVLL--VFLAV 152

  Fly   112 ANVFTVV--FAY 121
            ..|..|:  |||
plant   153 QTVIAVMAGFAY 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 19/72 (26%)
AT1G11020NP_563883.1 RING_CH-C4HC3_MARCH 63..115 CDD:438158 17/55 (31%)

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