DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and marchf4b

DIOPT Version :10

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001025336.1 Gene:marchf4b / 562065 ZFINID:ZDB-GENE-041210-304 Length:378 Species:Danio rerio


Alignment Length:220 Identity:46/220 - (20%)
Similarity:76/220 - (34%) Gaps:83/220 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAPQASAGGD------STELER-----------------CCWICFETDKEAGRQAWVNPCLCRGT 47
            |...|:|||.      :.|..|                 .|.|||: ..|.|.  .::||.|.|:
Zfish    68 AGADAAAGGSGWTGAAAEEFSRDRKDDRFSFISYAEGTPVCRICFQ-GPEKGE--LLSPCRCSGS 129

  Fly    48 NKWVHQSCISLWIDEKTRINNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTNDLILTNLYNCLA 112
            .:..||.|:..||.|:       .:.:|..|..:|.:.         |:...|.|          
Zfish   130 VRSTHQPCLIKWISER-------GSWTCELCYYKYQVI---------AISTKNPL---------- 168

  Fly   113 NVFTVVFAYWSAVSFGAKTYLQITGQEGHVHQIIQSGDLLVVLVG--FPLISVV-LILGRLIP-- 172
                    .|.|:|.                .:|:...:...::|  |.:.|:. |:...|.|  
Zfish   169 --------QWQAISL----------------TVIEKVQIAAAILGSLFLIASISWLVWSSLSPSA 209

  Fly   173 -WEDALLRFIRICYSLLRSLSMMCL 196
             |:...|.| :|||.:...:.::|:
Zfish   210 KWQRQDLLF-QICYGMYGFMDVVCI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 19/77 (25%)
marchf4bNP_001025336.1 RING_CH-C4HC3_MARCH4_9 108..157 CDD:319725 18/58 (31%)

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