DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and Marchf11

DIOPT Version :10

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_808265.2 Gene:Marchf11 / 211147 MGIID:3608327 Length:400 Species:Mus musculus


Alignment Length:280 Identity:53/280 - (18%)
Similarity:96/280 - (34%) Gaps:116/280 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASAGGDSTEL--------ERCCWICFETDKEAGRQAWVNPCLCRGTNKWVHQSCISLWIDEKTRI 66
            :|:||.|.:.        :..|.|||: ..|.|.  .:|||.|.|:.::.||.|:..||.|:   
Mouse   147 SSSGGGSDQRSGHQHQHHQPICKICFQ-GAEQGE--LLNPCRCDGSVRYTHQLCLLKWISER--- 205

  Fly    67 NNNLQAVSCPQCQTEYTIAYPNLWIFDRALELTNDLILTNLYNCLANVFTVVFAYWSAVSFGAKT 131
                .:.:|..|...|.:.         |:::...                  ..|.::|     
Mouse   206 ----GSWTCELCCYRYHVT---------AIKMKQP------------------CQWQSIS----- 234

  Fly   132 YLQITGQEGHVHQIIQSGDLLVVLVG--FPLISVVLILGRLIP----WEDALLRFIRICYSLLRS 190
               ||        :::...::.|::|  |.:.||..:|.....    |:...:.| :|||.:...
Mouse   235 ---IT--------LVEKVQMIAVILGSLFLIASVTWLLWSAFSPYAVWQRKDILF-QICYGMYGF 287

  Fly   191 LSMMCLG-------------------------RKYDHQTEPYPSA------------PM------ 212
            :.::|:|                         ..||..|:...|:            |:      
Mouse   288 MDLVCIGLIVHEGAAVYRVFKRWRAVNLHWDVLNYDKATDIEESSRGESSTSRTLWLPLSALRNR 352

  Fly   213 -----TEYSASRVVCGAILL 227
                 |:.::.|..||.:||
Mouse   353 NLVHPTQLTSPRFQCGYVLL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 19/60 (32%)
Marchf11NP_808265.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..160 4/12 (33%)
RING_CH-C4HC3_MARCH11 166..225 CDD:438460 21/77 (27%)
YXXL motif 369..372 0/2 (0%)
PDZ-binding 397..400
Blue background indicates that the domain is not in the aligned region.

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