DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and rundc3a

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:NP_001072911.1 Gene:rundc3a / 780373 XenbaseID:XB-GENE-1003170 Length:440 Species:Xenopus tropicalis


Alignment Length:390 Identity:103/390 - (26%)
Similarity:179/390 - (45%) Gaps:73/390 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 NARDTAEIERSNLVNICKLVVKELLEQSLRY-GRMLDSDHLPLQHFFIVIEHVLGHGLRPKKGLL 336
            ::|:.| :||.||:.:|:..||.|||   :| ...:|.......:|..::||:|.|..   ||.:
 Frog    20 SSRNIA-VERKNLLTVCRFSVKTLLE---KYTAEPIDDSSEEFVNFAAILEHILSHRF---KGHV 77

  Fly   337 G-----PRKELWDLLQ----SVEHYCPEAQDITASVRDLPTVRTHIGRARAWLRIALMQKKLSDY 392
            .     .::..||.::    .|.:.|      .:|:.::..:.:...:.|||:|:|||:|:||:|
 Frog    78 SWFSTDGQRGFWDYIRIACSKVTNNC------ISSIENMENISSARAKGRAWIRLALMEKRLSEY 136

  Fly   393 L-QALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKEEDLDSQ-QGVIDFSLY 455
            : .||.:.|....|  |:..|:::.:|..|:.|:|:||:.||.:.|:|.|.:|.: ..|||::.|
 Frog   137 IVTALRDTRTTRRF--YDDGAILLREESSVLTGMLIGLSAIDFSFCLKGEGIDGKTPAVIDYTPY 199

  Fly   456 LR-----------------SSSRNADAAPEDSAPPALLDATG--------QGNMIAVLDQKNYIE 495
            |:                 ..|.:.|::||....|.|.|...        :.....|..||.|:|
 Frog   200 LKFTQSYDYLSEEDDRESVGGSSSEDSSPEHPYLPLLTDEESWYSKWRKMEQKFRIVYAQKGYLE 264

  Fly   496 ELNRHLNATVGNLQAKVESLTTTNALMKEDLAIARNSL----LALQAENQAMRQSTSAGDNNSTG 556
            ||.|.....:.||:|:.:.||...:...|.....::.|    |.||.:...:..|.:|.....|.
 Frog   265 ELVRLRETQLKNLEAENKRLTQRISEQAEQSLQEKHQLEGVILELQEQLTGLLPSETAPIKQFTP 329

  Fly   557 SGGSSDKDKEKASEELVEER--------RKNSELEKE-LKLQVSLKAESDMAMKLLEKDIHEKQD 612
            |.|:...::..:...|.:..        |::|.|..| |..::||.:||        :.:..|||
 Frog   330 SLGAPLVNQWPSLSTLNDNEAPVNPSLYRRHSFLSTEHLSAELSLSSES--------QRLDGKQD 386

  Fly   613  612
             Frog   387  386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 38/132 (29%)
CASP_C 495..>634 CDD:285395 32/131 (24%)
FYVE_RUFY1_like 813..874 CDD:277261
rundc3aNP_001072911.1 RUN 60..181 CDD:367169 37/131 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..233 4/19 (21%)
DUF5595 <243..290 CDD:375536 13/46 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..402 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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