DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31064 and Snx29

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:XP_006522729.1 Gene:Snx29 / 74478 MGIID:1921728 Length:819 Species:Mus musculus


Alignment Length:578 Identity:113/578 - (19%)
Similarity:221/578 - (38%) Gaps:131/578 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 EHVLGHGLRPKKGL------------LGPRKE----LWDLLQSV--EHYCPEAQDITASVRDLPT 368
            |.||.||::..:||            ...:.|    .|..::.|  :|   |.|...:    |..
Mouse    50 EAVLQHGMKRSRGLALTAAAIKQAAGFTSKTETEPVFWVYVKEVLNKH---ELQRFYS----LHH 107

  Fly   369 VRTHIGRARAWLRIALMQKKLSDYLQALIEHREDSLFDYYEPHALMMSDE-IVVIMGILVGLNVI 432
            :.:..||.|||||.||.:..|..||..|:..|. .|..:||..:.:|.:| ..::..:..|||.|
Mouse   108 ITSDAGRGRAWLRCALNEHSLERYLHMLLADRA-RLSTFYEDWSFVMDEERSSMLPTMAAGLNSI 171

  Fly   433 DCNLCVKEEDLDSQQ----GVIDFSLYLRSSSRNADAAPEDSAP--PALLDATGQGNMIAVL--- 488
            ...:.:..:||:.|.    .|.|.   |:.|::|..:..::|..  .:||......:.:::|   
Mouse   172 LFAINIDNKDLNGQSKFAPTVSDL---LKESTQNVTSLLKESTQGMSSLLREITASSAVSILIKP 233

  Fly   489 -DQKNYIEELNRHLNATVGNLQAKVESLTTTNALMKEDLAIARNSLLALQAENQAMRQSTSAGDN 552
             .:.:.:..::::::......:.:......||.:..:|....:.:...|:........|....|.
Mouse   234 EQETDPLPVISKNVHVDTRCKRERRRRKKVTNIVSFDDDEEEQGTGDTLKKMPGTAESSEENSDR 298

  Fly   553 NST-------GSGGSSDKDKEKASEELVEERRKNSELEKELKLQVSLKAESDMAMKLLEKDIHEK 610
            :|.       |:.|.:....:.:|...::....|.||..: ||.|          |.::.|:.|.
Mouse   299 SSVNIMAAFEGTFGPNSNGSQSSSSWKIDSASLNGELGYQ-KLDV----------KSIDDDVDEN 352

  Fly   611 QDTIV-------------SLRRQLDD---IKQINLEMYRKLQDCKASLTHKTELMTKLE-VQKED 658
            ::...             |..|.||.   :.|::  .:..||.........|:::..:. |....
Mouse   353 EEDAYRSPLGRGHTGHAESPDRTLDGNACLAQVH--GWAPLQVLHGDADADTDVLFPVSGVGSYG 415

  Fly   659 MA-STIDQLEK--------------KWSHDKSNLGE------ILKTTSQTLTTQVTASEERAARA 702
            .| :.:..||.              ::|.:.|:.|:      :|.:.|  :...:|..|.|.|..
Mouse   416 AADAPVGSLENGTGTENHIIPEPGLRYSREASSPGQGSPLSSLLPSAS--VPESMTVHELRQAIV 478

  Fly   703 EAESRIEREWRISLQEKELKLKEKIANLQGCLKELSE-EKERNGKLKADLDKVRTQWSEAQ---- 762
            ...:|                |:::....|.|:.|.: |.|.:..|:.::|.:|.:.:|.|    
Mouse   479 AMMNR----------------KDELEEENGSLRNLLDGEMEHSAALRQEVDALRRKVTEQQERHA 527

  Fly   763 TTLEELGIQLSVSKLKVSEMQDQERRQRQLLSGSAQSLQAMPEAVGSPGIWAPDSIAT 820
            |.::.|..:..|.|:::.:.....    |:|....|:.:|:      |.:|..|:..|
Mouse   528 TKVQALARENEVLKVQLKKYVGAV----QMLKREGQTAEAV------PSLWNVDAEVT 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 37/135 (27%)
CASP_C 495..>634 CDD:285395 24/161 (15%)
FYVE_RUFY1_like 813..874 CDD:277261 3/8 (38%)
Snx29XP_006522729.1 RUN 44..177 CDD:367169 37/134 (28%)
Smc <472..>634 CDD:224117 27/130 (21%)
PX_RUN 662..779 CDD:132810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839950
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.