DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and Snx29

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:XP_038942785.1 Gene:Snx29 / 689142 RGDID:1596162 Length:838 Species:Rattus norvegicus


Alignment Length:586 Identity:114/586 - (19%)
Similarity:217/586 - (37%) Gaps:148/586 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 EHVLGHGLRPKKGL------------LGPRKE----LWDLLQSV--EHYCPEAQDITASVRDLPT 368
            |.||.||::..:||            ...:.|    .|..::.|  :|   |.|...:    |..
  Rat    70 EAVLQHGMKRSRGLALTAAAIKQAAGFTSKTETEPVFWVYVKEVLSKH---ELQRFYS----LHH 127

  Fly   369 VRTHIGRARAWLRIALMQKKLSDYLQALIEHREDSLFDYYEPHALMMSDE-IVVIMGILVGLNVI 432
            :...:||.|||||.||.:..|..||..|:..| ..|..:||..:.:|.:| ..::..:..|||.|
  Rat   128 ITADVGRGRAWLRCALNEHSLERYLHMLLADR-TRLSTFYEDWSFVMDEERSSMLPTMAAGLNSI 191

  Fly   433 DCNLCVKEEDLDSQQ----GVIDFSLYLRSSSRNADAAPEDSAP--PALLDATGQGNMIAVL--- 488
            ...:.:..:||:.|.    .|.|.   |:.|::|..:..::|..  .:||......:.:::|   
  Rat   192 LFAINIDNKDLNGQSKFAPTVSDL---LKESTQNMTSLLKESTQGMSSLLREITASSAVSILIKP 253

  Fly   489 ----DQKNYIEELNRHLNATVGNLQAKVESLTTTNALMKEDLAIARNSLLALQAENQAMRQSTSA 549
                |....|.: |.|::|.....:.:.:.:|...:...:|                   :...|
  Rat   254 EQETDPLPVISK-NVHVDARCKRERRRRKKVTNIVSFDDDD-------------------EEQGA 298

  Fly   550 GD--NNSTGSGGSSDKDKEKASEELVE-------ERRKNSELEKELKL-QVSLKAE---SDMAMK 601
            ||  ....|:..||:::.:::|..::.       .....|:.....|: ..||..|   ..:.:|
  Rat   299 GDTLKKMPGTAESSEENSDRSSVNIMAAFEGPFGPNSNGSQSSNSWKMDSASLNGELGYQKLDVK 363

  Fly   602 LLEKDIHEKQDTIV-------------SLRRQLD---DIKQINLEMYRKLQDCKASLTHKTELMT 650
            .::.|:.|.::.:.             |..|.||   .:.|::  .:..||.........|:::.
  Rat   364 SIDDDVDESEEAVYRNPLGRGHTGHKESPDRTLDGNASLPQVH--GWAPLQVLHGDADADTDILF 426

  Fly   651 KLE------------VQKEDMASTIDQL---------EKKWSHDKSNLGEILKTTSQTLTTQVTA 694
            .:.            ...|:...|.|.:         |.......|.|..:|.:.|  :...:|.
  Rat   427 PVSGVGSYGTADAPVGSLENGTGTEDHILPEPGLRYREAGSPGRGSPLSSLLPSAS--VPESMTV 489

  Fly   695 SEERAARAEAESRIEREWRISLQEKELKLKEKIANLQGCLKELSE-EKERNGKLKADLDKVRTQW 758
            .|.|.|.....:|                |:::....|.|:.|.: |.|.:..|:.::|.:|.:.
  Rat   490 HELRQAIVAMMNR----------------KDELEEENGSLRNLLDGEMEHSAALRQEVDALRRKV 538

  Fly   759 SEAQ----TTLEELGIQLSVSKLKVSEMQDQERRQRQLLSGSAQSLQAMPEAVGSPGIWAPDSIA 819
            :|.|    |.::.|..:..|.|:::.:.....    |:|....|:.:.:      |.:|..|:..
  Rat   539 TEQQERHATKVQALARENEVLKVQLKKYVGAV----QMLKREGQTAEVV------PSLWNVDAEV 593

  Fly   820 T 820
            |
  Rat   594 T 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 37/135 (27%)
CASP_C 495..>634 CDD:285395 25/167 (15%)
FYVE_RUFY1_like 813..874 CDD:277261 3/8 (38%)
Snx29XP_038942785.1 RUN 64..197 CDD:397055 37/134 (28%)
COG1340 489..654 CDD:224259 26/132 (20%)
PX_RUN 681..798 CDD:132810
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343799
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4381
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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