DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and rundc3ab

DIOPT Version :10

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:XP_073773560.1 Gene:rundc3ab / 393118 ZFINID:ZDB-GENE-040426-842 Length:460 Species:Danio rerio


Alignment Length:452 Identity:113/452 - (25%)
Similarity:186/452 - (41%) Gaps:122/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 SSSSKRNSKRFSGLSTG---SGSGG-------NAGGGGGLDITDNARDTAEIERSNLVNICKLVV 293
            :::.|.:|.||:.|...   .||.|       :|...|.......:|..| :||.||:.:|:..|
Zfish     8 AAALKPSSGRFASLRLSIEREGSSGMEQSFMQSAMAMGAQSKKGFSRSIA-VERKNLITVCRFSV 71

  Fly   294 KELLEQSLRY-GRMLDSDHLPLQHFFIVIEHVLGHGLRPKKGLLGPRKELWDLLQ----SVEHYC 353
            |.|||   :| ...:|.......:|..::||:|.|..:........::..||.::    .|.:.|
Zfish    72 KTLLE---KYTAEPIDDSSEEFINFAAILEHILSHRFKGSGSWFDGQRSFWDFIRLACSKVPNNC 133

  Fly   354 PEAQDITASVRDLPTVRTHIGRARAWLRIALMQKKLSDYL-QALIEHREDSLFDYYEPHALMMSD 417
                  .:|:.::..:.:...:.|||||:|||:|:||:|: .||.:.|....|  |:..|:|:.:
Zfish   134 ------ISSIENMENINSSRAKGRAWLRVALMEKRLSEYIATALRDSRTTRRF--YDEGAIMLRE 190

  Fly   418 EIVVIMGILVGLNVIDCNLCVKEEDLDSQ-QGVIDFSLYLRSS----------------SRNADA 465
            |..|:.|:|:||..||.:.|:|.|.||.: :.|||::.||:.:                |.|:|.
Zfish   191 EATVLTGMLIGLGAIDFSFCLKGEALDGKSEAVIDYTPYLKFTQSYDYLSDDEDGQSVDSSNSDD 255

  Fly   466 APEDSAPPALLDATGQGNMIAVLD--------QKNYIEELNRHLNATVGNLQAKVESLTTTNALM 522
            :.|....|.:.|.....|....::        ||.|:|||.|...:.:.|::.:.:.||.     
Zfish   256 SVEHPYIPLVTDEESWRNKCRKMEQRFKIVNAQKGYLEELVRLRESQLKNVEMENKKLTA----- 315

  Fly   523 KEDLAIARNSLLALQAENQAMRQSTSAGDNNSTGSGGSSDKDKEKASEELVEERRKNSELEKELK 587
                     .|..||.::|                       |||...|       |..||.:.:
Zfish   316 ---------GLEELQQQSQ-----------------------KEKRELE-------NIILELQEQ 341

  Fly   588 LQVSLKAESDMAMKLLEKDIHEKQDTIVSLRRQLDDIKQIN----LEMYRKLQDCKASLTHK 645
            |...:..||..    |.||:               .|..:|    |:.|...:|.|  |.|:
Zfish   342 LTSLIPGESHP----LSKDL---------------SIPLVNQWPSLQNYNNQEDSK--LYHR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN_RUFY1_like 281..436 CDD:439043 49/160 (31%)
Smc <562..>807 CDD:440809 21/88 (24%)
FYVE_RUFY1_like 813..874 CDD:277261
rundc3abXP_073773560.1 None
Blue background indicates that the domain is not in the aligned region.

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