DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and rush

DIOPT Version :10

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:NP_569923.2 Gene:rush / 31105 FlyBaseID:FBgn0025381 Length:316 Species:Drosophila melanogaster


Alignment Length:222 Identity:52/222 - (23%)
Similarity:85/222 - (38%) Gaps:60/222 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   697 ERAARAEAESRIEREWRISLQEK-------ELKLKEKIANLQGCLKELSEEKERN---------- 744
            :|...:||.:|     ||:..|.       .|.::.::...:|.|.::..::.::          
  Fly     3 DRLVNSEANTR-----RIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRPKSRQFFLFNDIL 62

  Fly   745 -------GKLK-----------------ADLDKVRTQWSEAQTTLEELGIQLSVSKLKVSEMQDQ 785
                   ||.|                 ||....|..| ..:||.:...:..:.|..|...|...
  Fly    63 VYGNIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGW-YIRTTTKSFVVFAATSTEKQEWMAHI 126

  Fly   786 ERRQRQLLSGSAQSLQAMPEAVGSPGIWAPDSIATHCTACER-EFNLTRRKHHCRSCGEIFCKAC 849
            .:....||..|.:.     .......:|.||:.|:.|..|:: :|...:|:||||:||.:.|..|
  Fly   127 NKCVEDLLRKSGKK-----PVENHAAVWVPDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGC 186

  Fly   850 S--EHTLPLLNAQGQPGKPVRVCDNCY 874
            |  :..||     .|..|.:||||.||
  Fly   187 SAKKFLLP-----QQSTKALRVCDACY 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN_RUFY1_like 281..436 CDD:439043
Smc <562..>807 CDD:440809 25/150 (17%)
FYVE_RUFY1_like 813..874 CDD:277261 25/63 (40%)
rushNP_569923.2 PH_Phafin2-like 7..129 CDD:269927 21/127 (17%)
FYVE_PKHF 148..208 CDD:277257 25/64 (39%)
Blue background indicates that the domain is not in the aligned region.

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