DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and Rundc3a

DIOPT Version :10

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:NP_942053.2 Gene:Rundc3a / 303569 RGDID:735057 Length:454 Species:Rattus norvegicus


Alignment Length:394 Identity:102/394 - (25%)
Similarity:163/394 - (41%) Gaps:105/394 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 IERSNLVNICKLVVKELLEQSLRY-GRMLDSDHLPLQHFFIVIEHVLGHGLR---PKKGLLGP-- 338
            :||.||:.:|:..||.|||   :| ...:|.......:|..::|.:|.|..:   |    .||  
  Rat    26 VERRNLITVCRFSVKTLLE---KYTAEPIDDSSEEFVNFAAILEQILSHRFKACAP----AGPVS 83

  Fly   339 ------RKELWDLLQ----SVEHYCPEAQDITASVRDLPTVRTHIGRARAWLRIALMQKKLSDYL 393
                  ::..||.::    .|.:.|      .:|:.::..:.|...:.|||:|:|||:|::|:|:
  Rat    84 WFSSDGQRGFWDYIRLACSKVPNNC------VSSIENMENISTARAKGRAWIRVALMEKRMSEYI 142

  Fly   394 -QALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKEEDLDSQQG-VIDFSLYL 456
             .||.::|....|  |:..|:|:.:|..|:.|:|:||:.||.:.|:|.|.||.:.. |||::.||
  Rat   143 TTALRDNRTTRRF--YDSGAIMLREEATVLTGMLIGLSAIDFSFCLKGEVLDGKTPVVIDYTPYL 205

  Fly   457 R-----------------SSSRNADAAPEDSAPPALLDATGQGN--------MIAVLDQKNYIEE 496
            :                 .||.:.|.:||....|.:.|.....|        ...|..||.|:||
  Rat   206 KFTQSYDYLTDEEERHSAESSTSEDNSPEHPYLPLVTDEDSWYNKWHKMEQKFRIVYAQKGYLEE 270

  Fly   497 LNR-------HLNATVGNLQAKVESLTTTNALMKEDLAIARNSLLALQAE----NQAMRQSTSAG 550
            |.|       .|.|....||.::|.....|...|.:|   ...:|.||.:    ....|.....|
  Rat   271 LVRLRESQLKDLEAENRRLQLQLEEAAAQNQREKREL---EGVILELQEQLPDPPPPPRTGLIPG 332

  Fly   551 DNNSTGSGGSSDKDKEKASEELV---------------EERRKNSEL--------EKELKLQVSL 592
            |:.....|          |:||.               .|...||:|        .:.|..:.||
  Rat   333 DHAPLAQG----------SKELTTALVNQWPSLSTLSRPEGASNSKLFRRHSFMSTEPLSAEASL 387

  Fly   593 KAES 596
            .::|
  Rat   388 SSDS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN_RUFY1_like 281..436 CDD:439043 50/171 (29%)
Smc <562..>807 CDD:440809 11/58 (19%)
FYVE_RUFY1_like 813..874 CDD:277261
Rundc3aNP_942053.2 RUN_RUNDC3A 30..185 CDD:439061 48/169 (28%)
bZIP <264..304 CDD:473870 13/39 (33%)
Blue background indicates that the domain is not in the aligned region.

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