DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and Rundc3b

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:NP_001334240.1 Gene:Rundc3b / 242819 MGIID:2685286 Length:457 Species:Mus musculus


Alignment Length:463 Identity:129/463 - (27%)
Similarity:211/463 - (45%) Gaps:76/463 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 SKRFSGLSTGSGSGGNAGGGGGLDITDNARDTAEIERSNLVNICKLVVKELLEQSLRYGRMLDSD 310
            |:...||   |||.|..|||||.. :.:||:.| :||.||:.:|:..||.|:::|.  ...:|..
Mouse     3 SRSLGGL---SGSRGGGGGGGGKK-SLSARNAA-VERRNLITVCRFSVKTLIDRSC--FETIDDS 60

  Fly   311 HLPLQHFFIVIEHVLGHGLRPKK---GLLGPRKELWDLLQSVEHYCPE-AQDITASVRDLPTVRT 371
            .....:|..|:|.:|.|.|:.:.   |...|| ..||.::..   |.: :|:...|:.::..|.:
Mouse    61 SPEFNNFAAVLEQILSHRLKGQVTWFGYESPR-SFWDYIRVA---CRKVSQNCICSIENMENVSS 121

  Fly   372 HIGRARAWLRIALMQKKLSDYLQ-ALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCN 435
            ...:.|||:|:|||:|.||:|:. ||.:.:....|  ||..|:::.:|..::.|:|:|||.||.:
Mouse   122 SRAKGRAWIRVALMEKHLSEYISTALRDFKTTRRF--YEDGAIVLGEEANMLAGMLLGLNAIDFS 184

  Fly   436 LCVKEEDLDSQ-QGVIDFSLYLR------------------SSSRNADAAPEDSAPPALLDATGQ 481
            .|:|.|.||.. ..|||::.||:                  .||.:..:.||:..||.:||....
Mouse   185 FCLKGEGLDGTFPAVIDYTPYLKFEQSSDSISSDEEELRTFGSSDSESSTPENVGPPLILDENTW 249

  Fly   482 GNMI--------AVLDQKNYIEELNR----HLNATVGN---LQAKVESLTTTNALMKEDLAI--- 528
            .|..        ..|:||.|:|||.|    .|:.:|..   |..::|.....:.|.||.|..   
Mouse   250 FNKCKRVRQKYQLTLEQKGYLEELLRLRENQLSESVSQNKILLQRIEDSDLAHKLEKEQLEYIIV 314

  Fly   529 -ARNSLLALQAENQAMRQSTSAGDNNSTGSGGSSDKDKEKASEELVEERRKNSELEKELKLQVSL 592
             .::.|..|:..:...||..:|.......|.|:.|.: ..|.:.|:..:......:|..:....|
Mouse   315 ELQDQLTVLKNNDLRSRQELTAHLTKQWPSPGALDVN-AVALDTLLYRKHNKQWYDKSYQSLDQL 378

  Fly   593 KAESDMAMKLLEKDIHE----KQDTIVSLRRQLDDIKQI--------NLEMYRKL-----QDCKA 640
            .||..::...|:....:    |||::..:....:|...:        ::..|:.|     .||.|
Mouse   379 SAEVSLSQASLDPSHSQEGDGKQDSLNFIGEGKEDTPSLLGLCGSLTSVASYKSLTSLKSNDCLA 443

  Fly   641 SLTHKTEL 648
            |.|  |||
Mouse   444 SPT--TEL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 41/127 (32%)
CASP_C 495..>634 CDD:285395 32/161 (20%)
FYVE_RUFY1_like 813..874 CDD:277261
Rundc3bNP_001334240.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839949
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4381
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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