DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and lst-2

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:NP_508756.2 Gene:lst-2 / 180712 WormBaseID:WBGene00003084 Length:661 Species:Caenorhabditis elegans


Alignment Length:667 Identity:139/667 - (20%)
Similarity:237/667 - (35%) Gaps:215/667 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 GLDITDNARDTAEIERSNLVNICKLVVKE-------LLEQSLR----YGRMLDSDHLPLQHFFIV 320
            |.:|.|:     |.|...:..:.|.|.|:       |..||||    |..::..:.|.....|..
 Worm   112 GSNIIDH-----ETESDLIRPLAKDVTKQLDFLRDLLKNQSLRDPSAYNPVIKENLLKFDKLFAE 171

  Fly   321 IEHVLGHGLRPKKGLLGPRKELWDLLQSVEHYCPEAQDITASVRDLPTVRTHIGRARAWLRIALM 385
            .|:.....:.|.|.:             .||         .|..|:..:.:.:      |.:||:
 Worm   172 FEYQYVSAMVPVKSV-------------KEH---------DSQLDVAVLFSEV------LSLALV 208

  Fly   386 QKKLSDYLQALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKEEDLDSQQGVI 450
            :..::           ..|.||.:|..::....:.::.|:||..|.. .|:.|..|:| |:....
 Worm   209 KDLIT-----------QDLIDYCDPSVMIAIPRLGIVWGLLVYSNGA-LNVDVPAENL-SEMFRP 260

  Fly   451 DFSLYLRSSS------------------RNADAAPEDSAPPALL-----DATGQGNMIAVLDQKN 492
            .:||.::..:                  :...|.|||::....:     :||.:..  |..:|:.
 Worm   261 FYSLLVKIRNLLRILTPTELTKLETVLCKGESAVPEDTSSTLTMSDFRTNATDEEK--AKNNQRV 323

  Fly   493 YIEELNRHLNATVGNLQAKV-ESLTTTNALMKEDLAIARNSLLALQAENQAMRQSTSAGDNNSTG 556
            ::.::.   :.:..:|.:.| :|.:.|.:|....||...:.     :|....:.....||:.:.|
 Worm   324 WMCDMP---SDSTSSLDSSVQDSSSETTSLASSALASPHSG-----SEENVSQIENEEGDDEAIG 380

  Fly   557 SGGSSDK---------------DKEKASEELV----EERRKNSELEKELKLQVS--LKAESD--M 598
            :..:|..               |.|::||..|    :|.|..|:.|....:|.|  |:.|:.  .
 Worm   381 TNSNSSNEVTESPETIEEPDNVDMEESSESEVDTHIDETRNESDDEITDDVQASDVLQVETKKCK 445

  Fly   599 AMKLLEKDIHEKQ-DTIVSLRRQLDDIKQINLEMYRKLQDCKASLTHKTELMTKLEVQKEDMAST 662
            :.:|||:...:|. .||:.:  |.|...||:.:..|........|.|:..:.         :|..
 Worm   446 SSRLLEQKKFDKSVKTIIPM--QTDPRSQIDPKNLRSRFRSSEDLVHRLFVC---------IAGV 499

  Fly   663 IDQLEKKWSHDKSNLGEILKTTSQTLTTQVTASEERAARAEAESRIEREWRISLQEKELKLKEKI 727
            .|||:..:|                                  |.|.:..::.||..|:....::
 Worm   500 ADQLQTNYS----------------------------------SEIRKVLKLILQPSEIIPVYEV 530

  Fly   728 ANLQGCLKELSEEKERNGKLKADLDKVRTQWSEAQTTLEELGIQLSVSKLKVSEMQDQERRQRQL 792
            .|                          .|.:.:||..||.|::                     
 Worm   531 VN--------------------------AQVANSQTEGEETGVE--------------------- 548

  Fly   793 LSGSAQSLQAMPEAVGSPGIWAPDSIATHCTACEREFNLTRRKHHCRSCGEIFCKACSEHTLPLL 857
                ||....:|..:|..  |.||.....||||...||..||:||||:||.|||..||.:|:. :
 Worm   549 ----AQETLPLPAFMGVR--WVPDEDCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCNTIS-I 606

  Fly   858 NAQGQPGKPVRVCDNCY 874
            ...|...| ||||:.||
 Worm   607 PEHGYDRK-VRVCNLCY 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 20/122 (16%)
CASP_C 495..>634 CDD:285395 35/163 (21%)
FYVE_RUFY1_like 813..874 CDD:277261 29/60 (48%)
lst-2NP_508756.2 SDA1 <361..>453 CDD:283052 21/96 (22%)
FYVE_LST2 559..623 CDD:277270 32/68 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2108
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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