DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31064 and rundc3aa

DIOPT Version :9

Sequence 1:NP_001287560.1 Gene:CG31064 / 43277 FlyBaseID:FBgn0051064 Length:877 Species:Drosophila melanogaster
Sequence 2:XP_001922267.3 Gene:rundc3aa / 100148117 ZFINID:ZDB-GENE-130530-533 Length:424 Species:Danio rerio


Alignment Length:422 Identity:106/422 - (25%)
Similarity:182/422 - (43%) Gaps:105/422 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 GLSTGSGSGGNAGGGGGLDITDNARDTAEIERSNLVNICKLVVKELLEQSLRY-GRMLDSDHLPL 314
            ||::...|..|.|                :||.||:.:|:..||.|||   :| ...:|......
Zfish     4 GLTSKKTSSRNIG----------------VERKNLITVCRFSVKTLLE---KYTAEPIDDSSEEF 49

  Fly   315 QHFFIVIEHVLGHGLRPKKGLLGP--RKELWDLLQSVEHYCPEA-QDITASVRDLPTVRTHIGRA 376
            .:|..::||:|.|..:...|....  ::..||.::..   |.:. .:..:|:..:..:.|...:.
Zfish    50 INFAAILEHILSHRFKGPGGWFSSDGQRSFWDYIRLA---CSKVYNNCISSIESIENISTSRAKG 111

  Fly   377 RAWLRIALMQKKLSDYLQ-ALIEHREDSLFDYYEPHALMMSDEIVVIMGILVGLNVIDCNLCVKE 440
            |||:|:|||:|:||:|:. ||.:.|....|  |:..|:|:.:|..|:.|:|:||:.||.:.|:|.
Zfish   112 RAWIRVALMEKRLSEYVAIALRDTRTTRRF--YDDGAVMLREEATVLTGMLIGLSAIDFSFCLKG 174

  Fly   441 EDLDSQ-QGVIDFSLYLR-----------SSSRNADAAPEDSAP------PALLDATGQGNMIAV 487
            |.||.: ..|||::.||:           ...|:.|::..|.:.      |.:.|.....|....
Zfish   175 EVLDGKTPAVIDYTPYLKFTQSYDYLSDEEDRRSVDSSASDESVAEHPYIPLVTDEETWSNKCRK 239

  Fly   488 LD--------QKNYIEELNRHLNATVGN-------LQAKVESLTTTNALMKEDL-AIARNSLLAL 536
            ::        ||.|:|||.|...:.:.|       |.||:|.|...:...|::| ||    :|.|
Zfish   240 MEQRFKIVNAQKGYLEELVRLRESQLKNVETENKRLDAKLEELQVQSQQEKKELEAI----ILEL 300

  Fly   537 QAENQA-----------------MRQSTSAGDNNSTGSGGSSDKDKEKASEELVEERRKNSELEK 584
            ||:...                 :.|..:|...|:.|:               |:..|:.|....
Zfish   301 QAQITGIIPCEPSHLVKGLSIPLINQWATAQATNNQGN---------------VKLFRRRSFHSL 350

  Fly   585 ELKLQVSLKAESDMAMKLLEKDIHEKQDTIVS 616
            :|...:||.::|.      ::|.::..||:.|
Zfish   351 DLSADLSLNSDSQ------KEDGNQNGDTVWS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31064NP_001287560.1 RUN 316..439 CDD:280855 38/126 (30%)
CASP_C 495..>634 CDD:285395 33/147 (22%)
FYVE_RUFY1_like 813..874 CDD:277261
rundc3aaXP_001922267.3 RUN 51..174 CDD:280855 38/127 (30%)
Prefoldin 241..>301 CDD:298833 18/63 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584055
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4381
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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