DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser and DNER

DIOPT Version :10

Sequence 1:NP_524527.3 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_620711.3 Gene:DNER / 92737 HGNCID:24456 Length:737 Species:Homo sapiens


Alignment Length:687 Identity:175/687 - (25%)
Similarity:252/687 - (36%) Gaps:206/687 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 EPCKHGGTC--------ENTAP---DKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSN 411
            :||::||.|        ::.||   ..|.|||..|:||..|::|..|||:.||.: |.|:..:|:
Human    51 QPCRNGGVCTSRPEPDPQHPAPAGEPGYSCTCPAGISGANCQLVADPCASNPCHH-GNCSSSSSS 114

  Fly   412 RTQAQVYRTSHG-------------------RSNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPG 457
            .:...:...:.|                   .|...|.::...:.:..|.:.|..||        
Human   115 SSDGYLCICNEGYEGPNCEQALPSLPATGWTESMAPRQLQPVPATQEPDKILPRSQA-------- 171

  Fly   458 LVSLGSLQL------------QQQLAPDFTCDCAAGWTGPTCEINIDECAGGPCEHGGTCIDLIG 510
            .|:|.:.|.            |.::.||..|..|:.          :..|||         .|:.
Human   172 TVTLPTWQPKTGQKVVEMKWDQVEVIPDIACGNASS----------NSSAGG---------RLVS 217

  Fly   511 GFRCECPPE----------------WHGDVCQVDVNECEAPHSAGI----AANALLTTTATAIIG 555
               .|.|..                |  .|......:|.......:    |:..|:.......:|
Human   218 ---FEVPQNTSVKIRQDATASLILLW--KVTATGFQQCSLIDGRSVTPLQASGGLVLLEEMLALG 277

  Fly   556 SN---------LSSTALLAALTSAVASTSLAIG-------PCINAKECRNQP--GSFACICKEGW 602
            :|         ::.:.:...||..|..::...|       .|....:|..:|  .:|:|.|:|.:
Human   278 NNHFIGFVNDSVTKSIVALRLTLVVKVSTCVPGESHANDLECSGKGKCTTKPSEATFSCTCEEQY 342

  Fly   603 GGVTCAENLDDCVGQ-CRNGATCIDL-----VNDYRCACASGFKGRDCETDIDECATSPCRNGGE 661
            .|..| |..|.|..: |:|.|:|||.     .:::.|.|..|:.|..|::.||.|...|||||..
Human   343 VGTFC-EEYDACQRKPCQNNASCIDANEKQDGSNFTCVCLPGYTGELCQSKIDYCILDPCRNGAT 406

  Fly   662 CVDMVGKFNCICPLGYSGSLCEEAKENCTPSPCL-EGHCLNTPEGYYCHCPPDRAGKHCEQLRPL 725
            |:..:..|.|.||.||.||.|||..:.|..|||. .|.|......:.|:|.|...|..|.||...
Human   407 CISSLSGFTCQCPEGYFGSACEEKVDPCASSPCQNNGTCYVDGVHFTCNCSPGFTGPTCAQLIDF 471

  Fly   726 CSQPPCNEGCFANVSLATSATTTTTTTTTATTTRKMAKPSGLPCSGHGSCEMSDVGTF--CKCHV 788
            |:..||                                       .||:|.  .|||.  |.|..
Human   472 CALSPC---------------------------------------AHGTCR--SVGTSYKCLCDP 495

  Fly   789 GHTGTFCEHNLNECSPNPCRNGGICLDGDGDFTCECMSGWTGKRCSERATGCYAGQCQNGGTCMP 853
            |:.|.:||...|||...||.|...|.|....:.|.|::.:.|..|.     .|.           
Human   496 GYHGLYCEEEYNECLSAPCLNAATCRDLVNGYECVCLAEYKGTHCE-----LYK----------- 544

  Fly   854 GAPDKALQPHCRCAPGWTGLFCAEAIDQCRGQPCHNGGTCESGAGWFRCVCAQGFSGPDCRINVN 918
                                      |.|....|.||.||:|......|:||.||:|.:|.|::|
Human   545 --------------------------DPCANVSCLNGATCDSDGLNGTCICAPGFTGEECDIDIN 583

  Fly   919 ECSPQPCQGGATCIDGIGGYSCICPPGRHGLRCEILL 955
            ||...||..|.:|:|...||:|.||.|..|..|||.|
Human   584 ECDSNPCHHGGSCLDQPNGYNCHCPHGWVGANCEIHL 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_524527.3 MNNL 83..238 CDD:462222
DSL 220..282 CDD:128366
EGF_CA 350..388 CDD:238011 14/40 (35%)
EGF_CA 490..526 CDD:238011 8/51 (16%)
EGF_CA 610..645 CDD:238011 12/40 (30%)
EGF_CA 647..683 CDD:238011 17/35 (49%)
EGF_CA 690..720 CDD:238011 9/30 (30%)
EGF_CA 798..833 CDD:238011 11/34 (32%)
EGF_CA 879..913 CDD:238011 14/33 (42%)
EGF_CA 916..952 CDD:238011 15/35 (43%)
VWC_out <993..1053 CDD:214565
DNERNP_620711.3 Interaction with NOTCH1. /evidence=ECO:0000250 44..133 25/82 (30%)
EGF_CA 351..390 CDD:238011 12/38 (32%)
EGF_CA 393..428 CDD:238011 17/34 (50%)
EGF_CA 431..465 CDD:238011 10/33 (30%)
EGF_CA 469..503 CDD:238011 13/74 (18%)
EGF_CA 507..541 CDD:238011 11/33 (33%)
EGF_CA 581..617 CDD:238011 15/35 (43%)
DNER_C 635..737 CDD:437162
Interaction with AP1G1 and somatodendritic targeting. /evidence=ECO:0000250 677..680
Blue background indicates that the domain is not in the aligned region.

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