DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and NOTCH2

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_077719.2 Gene:NOTCH2 / 4853 HGNCID:7882 Length:2471 Species:Homo sapiens


Alignment Length:965 Identity:290/965 - (30%)
Similarity:393/965 - (40%) Gaps:217/965 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 TSYSGVIL--------PSPEWKTLDHIGRNARITYRVRVQC--AVTYYNTTCT-----TFCRPRD 257
            |.::||:.        |.|     .|.|           ||  .:..|...|.     ..|..:.
Human   560 TGFTGVLCEENIDNCDPDP-----CHHG-----------QCQDGIDSYTCICNPGYMGAICSDQI 608

  Fly   258 DQFGHYACGSEGQKLCL-NGWQ--------GVNCEEAICKAGCDP-VHGKCDRPG----ECECRP 308
            |:.....|.::|:.:.| ||:|        |||||........:| :||.| ..|    .|.|.|
Human   609 DECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGIC-MDGINRYSCVCSP 672

  Fly   309 GWRGPLC------------------------------------------NECMVYPGCKHGSCNG 331
            |:.|..|                                          |||:..| |.||:|.|
Human   673 GFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNP-CIHGNCTG 736

  Fly   332 --SAWKCVCDTNWGGILCDQDLNFCGTHEPCKHGGTCENTAPDKYRCTCAEGLSGEQCEIVEHPC 394
              |.:||:||..|.||.|:.|.|.| ...||::||||:|.. :.|||||.:|..|..|::....|
Human   737 GLSGYKCLCDAGWVGINCEVDKNEC-LSNPCQNGGTCDNLV-NGYRCTCKKGFKGYNCQVNIDEC 799

  Fly   395 ATRPCRNGGTCTLKTSNRTQAQVYRTSHGRSNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPGLV 459
            |:.||.|.|||....|..|...|                      |.:.....|.:....||...
Human   800 ASNPCLNQGTCFDDISGYTCHCV----------------------LPYTGKNCQTVLAPCSPNPC 842

  Fly   460 SLGSLQLQQQLAPDFTCDCAAGWTGPTCEINIDECAGGPCEHGGTCIDLIGGFRCECPPEWHGDV 524
            ...::..:......:||.||.||.|..|.|:||||...||.:.|.|.:..|.:.|||||.:.|..
Human   843 ENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMD 907

  Fly   525 CQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALLAALTSAVASTSLAIGPCINAKECRN 589
            |:.|:::|.|                                            .||.|...|.:
Human   908 CEEDIDDCLA--------------------------------------------NPCQNGGSCMD 928

  Fly   590 QPGSFACICKEGWGGVTCAENLDDCVGQ-CRNGATCIDLVNDYRCACASGFKGRDCETDIDECAT 653
            ...:|:|:|..|:.|..|..::::|:.: |:||.||.|.||.|.|.|.:||.|..||.:|:||..
Human   929 GVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTE 993

  Fly   654 SPCRNGGECVDMVGKFNCICPLGYSGSLCEEAKENCTPSPCL-EGHCLNTPEGYYCHCPPDRAGK 717
            |.|.|||.|||.:..|:|:||:|::||.|......|:..||| ||.|::....|.|.||....||
Human   994 SSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGK 1058

  Fly   718 HCEQLRPLCSQPPC-NEG----------CFANVSLATSATTTTTTTTTATTTRKMAKPSGLPCSG 771
            :|:.|..|||:.|| |:|          |......|.:.......:.....:|:......| |..
Human  1059 NCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHL-CQH 1122

  Fly   772 HGSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICLDGDGDFTCECMSGWTGKRCSER 836
            .|.|..:....:|:|.:|:||::||..|:||:.|||::|..|.|..|.:.|||:.|:.|..|...
Human  1123 SGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYE 1187

  Fly   837 ATGCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTGLFCAEAIDQC-RGQPCHNGGTCESGAGWF 900
            ...|....|||||||:    |......|.|.||..||.|.|.||.| ||..|.|||.|....|.:
Human  1188 VDECQNQPCQNGGTCI----DLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGY 1248

  Fly   901 RCVCAQGFSGPDCRINVNECSPQPC--QGGATCIDGIGGYSCICPPGRHGLRCEILLS-DPKSAC 962
            .|.|..||:|..|..::|||...||  :|...||.....|.|:|.....|..||..:. .|:..|
Human  1249 SCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPC 1313

  Fly   963 QNASNTISPYTALNRSQNWLDIALTGRTEDDENCNACVCENGTS--RCTNLWCGLPNCYKVDP-L 1024
            .|.....   .|.|....::                |.|..|.|  ||.:. ||...|.|.:. :
Human  1314 LNGGTCA---VASNMPDGFI----------------CRCPPGFSGARCQSS-CGQVKCRKGEQCV 1358

  Fly  1025 SKSSNLSGVCKQHEVCVPALSETCLSSPCNVRGDCRALEPSRRVAPPRLPAKSSC 1079
            ..:|.....|.....|    ...|.||||...|.|.         |.|.|...||
Human  1359 HTASGPRCFCPSPRDC----ESGCASSPCQHGGSCH---------PQRQPPYYSC 1400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966
DSL 220..282 CDD:279722 16/77 (21%)
EGF_CA 350..388 CDD:238011 17/37 (46%)
EGF_CA 490..526 CDD:238011 15/35 (43%)
EGF_CA 610..645 CDD:238011 15/35 (43%)
EGF_CA 647..683 CDD:238011 18/35 (51%)
EGF_CA 798..833 CDD:238011 15/34 (44%)
EGF_CA 879..913 CDD:238011 16/34 (47%)
EGF_CA 916..952 CDD:238011 12/37 (32%)
VWC_out <993..1053 CDD:214565 16/62 (26%)
NOTCH2NP_077719.2 EGF_CA 182..218 CDD:238011
EGF_CA 260..296 CDD:238011
EGF_CA 298..335 CDD:238011
EGF_CA 415..454 CDD:238011
EGF_CA 456..492 CDD:238011
EGF_CA 495..530 CDD:238011
EGF_CA 532..568 CDD:238011 3/7 (43%)
EGF_CA 570..604 CDD:238011 8/49 (16%)
EGF_CA 608..643 CDD:238011 10/34 (29%)
EGF_CA 645..679 CDD:238011 10/34 (29%)
EGF_CA 682..717 CDD:238011 0/34 (0%)
EGF_CA 757..793 CDD:238011 17/37 (46%)
EGF_CA 795..831 CDD:238011 12/57 (21%)
EGF_CA 873..909 CDD:238011 15/35 (43%)
EGF_CA 911..947 CDD:238011 12/79 (15%)
EGF_CA 949..985 CDD:238011 15/35 (43%)
EGF_CA 987..1022 CDD:238011 18/34 (53%)
EGF_CA 1026..1061 CDD:238011 13/34 (38%)
EGF_CA 1117..1147 CDD:238011 9/30 (30%)
EGF_CA 1151..1185 CDD:238011 14/33 (42%)
EGF_CA 1188..1223 CDD:238011 15/38 (39%)
EGF_CA 1225..1262 CDD:238011 16/36 (44%)
EGF_CA 1264..1302 CDD:238011 12/37 (32%)
EGF_CA <1312..1343 CDD:238011 9/49 (18%)
Notch 1423..1456 CDD:278494
Notch 1463..1497 CDD:278494
Notch 1501..1534 CDD:278494
NOD 1540..1591 CDD:284282
NODP 1620..1673 CDD:284987
Ank_2 <1820..1907 CDD:289560
ANK repeat 1827..1874 CDD:293786
ANK 1872..1997 CDD:238125
ANK repeat 1877..1907 CDD:293786
Ank_2 1881..1974 CDD:289560
ANK 1938..2062 CDD:238125
ANK repeat 1943..1974 CDD:293786
Ank_2 1948..2040 CDD:289560
ANK repeat 1976..2007 CDD:293786
ANK repeat 2009..2040 CDD:293786
Chorion_3 <2292..2421 CDD:253174
DUF3454 2381..2444 CDD:288764
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I12003
eggNOG 1 0.900 - - E33208_3BAFT
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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