DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and notch1a

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_571516.1 Gene:notch1a / 30718 ZFINID:ZDB-GENE-990415-173 Length:2437 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966
DSL 220..282 CDD:279722
EGF_CA 350..388 CDD:238011
EGF_CA 490..526 CDD:238011
EGF_CA 610..645 CDD:238011
EGF_CA 647..683 CDD:238011
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
notch1aNP_571516.1 EGF_CA 141..174 CDD:238011
EGF_CA 177..215 CDD:238011
EGF_CA 294..331 CDD:238011
EGF_CA 334..369 CDD:238011
EGF_CA 411..449 CDD:238011
EGF_CA 451..487 CDD:238011
EGF_CA 491..524 CDD:238011
EGF_CA 526..562 CDD:238011
EGF_CA 564..599 CDD:238011
EGF_CA 601..637 CDD:238011
EGF_CA 676..711 CDD:238011
EGF_CA 716..748 CDD:238011
EGF_CA 751..787 CDD:238011
EGF_CA 789..825 CDD:238011
EGF_CA 867..903 CDD:238011
EGF_CA 905..940 CDD:238011
EGF_CA 943..979 CDD:238011
EGF_CA 986..1017 CDD:238011
EGF_CA 1019..1055 CDD:238011
EGF_CA 1144..1178 CDD:238011
EGF_CA 1182..1217 CDD:238011
EGF_CA 1219..1263 CDD:238011
EGF_CA 1265..1303 CDD:238011
NL 1440..1477 CDD:197463
LNR 1 1447..1487
Notch 1485..1520 CDD:278494
LNR 2 1488..1525
Notch 1523..1559 CDD:278494
LNR 3 1526..1566
NOD 1565..1616 CDD:284282
NODP 1664..1721 CDD:284987
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1770..1790
Ank_2 <1860..1946 CDD:289560
ANK 1862..2003 CDD:238125
ANK repeat 1867..1913 CDD:293786
ANK 1 1867..1910
ANK repeat 1915..1946 CDD:293786
ANK 2 1915..1944
Ank_2 1920..2013 CDD:289560
ANK repeat 1948..1979 CDD:293786
ANK 3 1948..1978
ANK 1977..2101 CDD:238125
ANK 4 1982..2011
Ank_2 1987..2079 CDD:289560
ANK repeat 2015..2079 CDD:293786
ANK 5 2015..2044
ANK 6 2048..2077
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2127..2174
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2356..2437
DUF3454 2364..2424 CDD:288764
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11360
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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