Sequence 1: | NP_001287558.1 | Gene: | Ser / 43275 | FlyBaseID: | FBgn0004197 | Length: | 1407 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100652.1 | Gene: | Crb1 / 304825 | RGDID: | 1309947 | Length: | 1407 | Species: | Rattus norvegicus |
Alignment Length: | 1502 | Identity: | 288/1502 - (19%) |
---|---|---|---|
Similarity: | 394/1502 - (26%) | Gaps: | 792/1502 - (52%) |
- Green bases have known domain annotations that are detailed below.
Fly 246 NTTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGV--NCEEAICKAGC--DPVHGKC---DRPGE 303
Fly 304 ----CECRPGWRGPLC----NECMVYPG---CKHGSCNGSAWK------CVCDTNWGGILCDQDL 351
Fly 352 NFCGTHEPCKHGGTCENTAPDKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQ 416
Fly 417 VYRTSHGRSNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAG 481
Fly 482 WTGPTCEINIDECAGGPCEHGGTCIDLIGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALL 546
Fly 547 TTTATAIIGSNLSSTALLAALTSAVASTSLAIGPCINAKECRNQPGSFACICK-EGWGGVTCAEN 610
Fly 611 LDDCVGQ-CRNGATCIDLVNDYRCACASGFKGRDCETDIDECATSPCRNGGECV-----DMVGK- 668
Fly 669 --------------FNCICPLGYSGSLCEEAKENCTPSPCLE-GHCLNTPEGYYCHCPPD----- 713
Fly 714 -RAGKHCEQL-----------------------------------RPLCSQ-------------- 728
Fly 729 ---------PPCN-----------------------------EGC-------------------- 735
Fly 736 ------------FA-NVSLATSATTTTTTTTT-------------------------ATTTRKMA 762
Fly 763 K-------------------------------PSGL-----------------PCSGHGSCEMSD 779
Fly 780 VGTFCKCHVGHTGTFC------------------------------------------------- 795
Fly 796 -----------EH---------------------------------------------------- 797
Fly 798 ---------------------------------------NL------------------------ 799
Fly 800 --NECSPNPCRNGGICLDGDGDFTCECMSGWTGKRCSE----RATGC-YAGQCQ---NGGTCMPG 854
Fly 855 APDKALQP-------------------------------HCRCAP-------------------- 868
Fly 869 ----------------GW-------------TGLFCAEAIDQ----------------------- 881
Fly 882 -------------------------------------------------------------CRGQ 885
Fly 886 PCHNGGTCESGAGWFRCVCAQGFSGPDCRINVNECSPQPCQGGATCIDGIGGYSCICPPGRHGLR 950
Fly 951 CEILLSDPKS-ACQNASNTISPYTALNRSQNWLDIAL---TGRTEDDENCNACVCENGTSRCTNL 1011
Fly 1012 WCGLPNCYKVDPLSKSSNLSGVCKQHE-----VCVPALS--------ETCLSSPCNVRGDCRALE 1063
Fly 1064 PSRRVAPPRLPAKSSCWPNQAVVNENCA------RLTILLALERVGKGASVEGLCSLVRVLLAAQ 1122
Fly 1123 LIKKPAS 1129 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ser | NP_001287558.1 | MNNL | 83..161 | CDD:284966 | |
DSL | 220..282 | CDD:279722 | 9/37 (24%) | ||
EGF_CA | 350..388 | CDD:238011 | 12/37 (32%) | ||
EGF_CA | 490..526 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 610..645 | CDD:238011 | 13/35 (37%) | ||
EGF_CA | 647..683 | CDD:238011 | 17/55 (31%) | ||
EGF_CA | 798..833 | CDD:238011 | 16/60 (27%) | ||
EGF_CA | 879..913 | CDD:238011 | 15/117 (13%) | ||
EGF_CA | 916..952 | CDD:238011 | 17/35 (49%) | ||
VWC_out | <993..1053 | CDD:214565 | 13/72 (18%) | ||
Crb1 | NP_001100652.1 | EGF_CA | 73..108 | CDD:238011 | 11/34 (32%) |
EGF | 115..145 | CDD:278437 | 10/36 (28%) | ||
EGF_CA | 149..184 | CDD:238011 | 12/36 (33%) | ||
EGF_CA | 188..223 | CDD:238011 | 11/96 (11%) | ||
EGF_CA | 226..261 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 263..300 | CDD:238011 | 12/80 (15%) | ||
EGF_CA | <310..338 | CDD:238011 | 12/27 (44%) | ||
EGF_CA | 340..396 | CDD:238011 | 17/55 (31%) | ||
EGF_CA | 398..>425 | CDD:214542 | 12/26 (46%) | ||
Laminin_G_2 | 515..650 | CDD:280389 | 10/134 (7%) | ||
EGF_CA | 677..708 | CDD:238011 | 8/30 (27%) | ||
Laminin_G_2 | 744..861 | CDD:280389 | 2/116 (2%) | ||
EGF | 892..921 | CDD:278437 | 12/28 (43%) | ||
LamG | 955..1103 | CDD:238058 | 9/147 (6%) | ||
EGF_CA | <1147..1176 | CDD:238011 | 12/28 (43%) | ||
EGF_CA | 1178..1213 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1298..1334 | CDD:238011 | 11/46 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BAFT | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |