DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser and dla

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_571029.2 Gene:dla / 30131 ZFINID:ZDB-GENE-980526-29 Length:772 Species:Danio rerio


Alignment Length:673 Identity:211/673 - (31%)
Similarity:286/673 - (42%) Gaps:173/673 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LIALILILLVHKISAAGNFELEILEISNTNSHLLNGYCC--GMPAELRATKTIGCSPCTTAFRLC 130
            |:..||.:|:.:.|::|.|||::.|..|......|..||  |:....:..:      |.|.||:|
Zfish     8 LLFSILYMLLCQASSSGVFELKLQEFLNKKGVQGNKNCCKGGLTTSYQQCE------CKTFFRIC 66

  Fly   131 LKEYQTTEQGASISTGCSFGNATTKILGGSSFVLSD--PGVGAIVLP----FTFRWTKSFTLILQ 189
            ||.||   ..||....|::|...|.:||.:||.:.|  |. |:...|    |.|.|..:|:||::
Zfish    67 LKHYQ---PNASPEPPCTYGGTVTPVLGSNSFQVPDTLPD-GSFTNPIRMNFGFTWPGTFSLIIE 127

  Fly   190 AL-----DMYNTSYPDAERLIEETSYSGVILPSPEW-KTLDHIGRNARITYRVRVQCAVTYYNTT 248
            ||     :...|..|  ||:|...:....:....:| :.|..:|| ..:.|..|..|...||...
Zfish   128 ALHADSKEDLTTENP--ERIISTMTTQRHLTVGEDWSQDLHSVGR-TELKYSYRFVCDEHYYGEG 189

  Fly   249 CTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCEEAICKAGCDPVHGKCDRPGECECRPGWRGP 313
            |:.|||||||.|||:.||..|:.:|..||:|..|.|.||..|||..||.|::||||:||.|::|.
Zfish   190 CSVFCRPRDDAFGHFTCGERGEIICDAGWKGQYCTEPICLPGCDEEHGFCEKPGECKCRVGFKGR 254

  Fly   314 LCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQDLNFCGTHEPCKHGGTCENTAPDKYRCTC 378
            .|:||:.||||.||:|. ..|:|.|...|||:.|:||||:|..|:||.:|.||.||....|.|:|
Zfish   255 YCDECIRYPGCLHGTCQ-QPWQCNCQEGWGGLFCNQDLNYCTHHKPCLNGATCSNTGQGSYTCSC 318

  Fly   379 AEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGRSNMGRPVRRSSSMRSLDHL 443
            ..|.||..|||..:.|...||||||:||                                     
Zfish   319 RPGFSGASCEIEVNECTGNPCRNGGSCT------------------------------------- 346

  Fly   444 RPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEINIDECAGGPCEHGGTCIDL 508
                                     .:...::|.|..|:.|..||::...||.|||.:||.|.| 
Zfish   347 -------------------------DMENTYSCTCPPGFYGKNCELSAMTCADGPCFNGGRCAD- 385

  Fly   509 IGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALLAALTSAVAS 573
                                                                             
Zfish   386 ----------------------------------------------------------------- 385

  Fly   574 TSLAIGPCINAKECRNQPGSFACICKEGWGGVTCAENLDDCVGQ-CRNGATCIDLVNDYRCACAS 637
                           |..|.:.|.|..|:.|..|.:.:|.|... |.|||.|:||||.|.|.|..
Zfish   386 ---------------NPDGGYFCQCPTGYAGFNCEKKIDHCSSSPCSNGARCVDLVNSYLCQCPD 435

  Fly   638 GFKGRDCETDIDECATSPCRNGGECVDMVGKFNCICPLGYSGSLCEEAKENCTPSPCLEG-HCLN 701
            ||.|.:|:...|||:..||:|||.|.:....:.|.||.||:|..|......|..:||..| .|..
Zfish   436 GFTGMNCDRAGDECSMYPCQNGGTCQEGASGYMCTCPPGYTGRNCSSPVSRCQHNPCHNGATCHE 500

  Fly   702 TPEGYYCHCPPDRAGKHCEQLRP 724
            ....|.|.|.....|::|:.|.|
Zfish   501 RNNRYVCACVSGYGGRNCQFLLP 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 26/79 (33%)
DSL 220..282 CDD:279722 27/62 (44%)
EGF_CA 350..388 CDD:238011 18/37 (49%)
EGF_CA 490..526 CDD:238011 9/35 (26%)
EGF_CA 610..645 CDD:238011 17/35 (49%)
EGF_CA 647..683 CDD:238011 15/35 (43%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
dlaNP_571029.2 MNNL 23..94 CDD:284966 26/79 (33%)
DSL 161..223 CDD:128366 27/62 (44%)
EGF_CA 290..328 CDD:238011 18/37 (49%)
EGF_CA 331..366 CDD:238011 13/96 (14%)
EGF_CA <375..405 CDD:238011 13/110 (12%)
EGF_CA 408..442 CDD:238011 17/33 (52%)
EGF_CA 447..480 CDD:238011 15/32 (47%)
EGF_CA 488..519 CDD:238011 8/30 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578048
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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