DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and dlc

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_571019.1 Gene:dlc / 30120 ZFINID:ZDB-GENE-000125-4 Length:664 Species:Danio rerio


Alignment Length:636 Identity:199/636 - (31%)
Similarity:288/636 - (45%) Gaps:142/636 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LIALILILLVHKISAAGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCSPCTTAFRLCLK 132
            |....:::..|...::|.|||::|..::|:|      .|.           |.|.|...||:|||
Zfish     6 LTCFFILISSHLGKSSGVFELKVLSFTSTSS------VCK-----------GSSDCQIFFRVCLK 53

  Fly   133 EYQTTEQGASI--STGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQA--LDM 193
            ..|     |.|  ...|::|...::||...|...|    ..|.:||.|:|....:||::.  .:.
Zfish    54 HSQ-----ALILPEPPCTYGTGMSEILSADSISSS----AYISVPFNFKWPGIVSLIIETWNAET 109

  Fly   194 YNTSYPDAERLIEETSYSGVILPSPEWKTLDHIGRNARITYRVRVQCAVTYYNTTCTTFCRPRDD 258
            .:.|..:...:|...:....:..|.:|....|:||.:::.:..||.|...|:...|:.|||||:|
Zfish   110 SDQSTENNNNMISRLATKRRLAISEDWSQDVHLGRQSQLRFSYRVVCDEFYHGEECSDFCRPRND 174

  Fly   259 QFGHYACGSEGQKLCLNGWQGVNCEEAICKAGCDPVHGKCDRPGECECRPGWRGPLCNECMVYPG 323
            .|||:.|.:.|.::||.||:|..|.|.||.:||...:|.|:.||||:||.||.||||:||..:||
Zfish   175 TFGHFNCDAAGNRICLPGWKGDYCTEPICLSGCSEENGYCEAPGECKCRIGWEGPLCDECTRHPG 239

  Fly   324 CKHGSCNGSAWKCVCDTNWGGILCDQDLNFCGTHEPCKHGGTCENTAPDKYRCTCAEGLSGEQCE 388
            |.||:|| ..::|.|...|||:.|::|||||..|:||::..||.||....|.|.|..|.||:.||
Zfish   240 CLHGTCN-QPFQCTCKEGWGGLFCNEDLNFCTNHKPCRNDATCTNTGQGSYTCICKPGFSGKNCE 303

  Fly   389 IVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGRSNMGRPVRRSSSMRSLDHLRPEGQALNGS 453
            |..:.|.:.||:|||:|                :.:.|                           
Zfish   304 IETNECDSNPCKNGGSC----------------NDQEN--------------------------- 325

  Fly   454 SSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEINIDECAGGPCEHGGTCIDL-IGGFRCECP 517
                               |:||.|..|:.|..||::...||.|||.:||||::. .|.:.|.||
Zfish   326 -------------------DYTCTCPQGFYGKNCEVSAMTCADGPCFNGGTCMEKGSGSYSCRCP 371

  Fly   518 PEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALLAALTSAVASTSLAIGPCI 582
            |.:.|..|:..::.|.:                                            .||.
Zfish   372 PGYMGSNCEKKIDRCSS--------------------------------------------DPCA 392

  Fly   583 NAKECRNQPGSFACICKEGWGGVTCAENLDDCVGQ-CRNGATCIDLVNDYRCACASGFKGRDCET 646
            |..:|.:......|.|:.|:.|..|..|:|||... |:|..||:|.:|.|.|.|..||.|:||..
Zfish   393 NGGQCLDLGNKATCRCRPGFTGSRCETNIDDCSSNPCQNAGTCVDGINGYTCTCTLGFSGKDCRV 457

  Fly   647 DIDECATSPCRNGGECVDMVGKFNCICPLGYSGSLCEEAKENCTP--SPCL 695
            ..|.|:..||:|||.|........|.||.|:.|:.| |.|:..||  ||.|
Zfish   458 RSDACSFMPCQNGGTCYTHFSGPVCQCPAGFMGTQC-EYKQKPTPVNSPAL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 23/79 (29%)
DSL 220..282 CDD:279722 25/61 (41%)
EGF_CA 350..388 CDD:238011 18/37 (49%)
EGF_CA 490..526 CDD:238011 15/36 (42%)
EGF_CA 610..645 CDD:238011 17/35 (49%)
EGF_CA 647..683 CDD:238011 13/35 (37%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
dlcNP_571019.1 MNNL 21..79 CDD:284966 23/79 (29%)
DSL 136..198 CDD:279722 25/61 (41%)
EGF_CA 265..303 CDD:238011 18/37 (49%)
EGF_CA 307..341 CDD:238011 14/95 (15%)
EGF_CA <350..380 CDD:238011 13/29 (45%)
EGF_CA 383..418 CDD:238011 9/78 (12%)
EGF_CA 420..455 CDD:238011 16/34 (47%)
EGF_CA <466..494 CDD:238011 12/28 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578056
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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