DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and Fbln7

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:XP_215832.6 Gene:Fbln7 / 296145 RGDID:1310131 Length:439 Species:Rattus norvegicus


Alignment Length:461 Identity:106/461 - (22%)
Similarity:160/461 - (34%) Gaps:153/461 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 QAQVYRTSHGRSNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPGL------VSLGSLQLQQQLAP 472
            :.|..|.:.|..||  ..|.::...::..:.|:...:   |.|.|      ...||..|... ..
  Rat    45 KGQETRFTEGIRNM--KSRLTALQNTVSKMTPDAPPV---SCPALDAPPNGKKFGSKYLVDH-EV 103

  Fly   473 DFTCD------------CAAG--WTG--PTCEINIDECAGGPCEHGGTCIDLIGGFRCECPPEWH 521
            .|||:            |.|.  |||  |.|. :..||:..||.:||||::.:..:||.|||...
  Rat   104 HFTCNPGFQLVGPXSVVCLANGTWTGEQPRCR-DTSECSSQPCHNGGTCVEGVHHYRCICPPGKT 167

  Fly   522 GDVCQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALLAALTSAVASTSLAIGPCINAKE 586
            |:.||   ::.:|....|:|.::..:                                   .|..
  Rat   168 GNRCQ---HQTQAAAPGGVAGDSAYS-----------------------------------RAPR 194

  Fly   587 CRNQPGSFACICKEGW------GGVTCAENLDDC--VGQ------CRNGATCIDLVNDYRCACAS 637
            |........|.|:.|:      ||.:..:::::|  .||      |.:  .|::....|||.|.|
  Rat   195 CAQVEREQHCSCEAGFHLSGTAGGHSVCQDVNECEIYGQEGRPRLCMH--ACVNTPGSYRCTCPS 257

  Fly   638 GFK----GRDCETDIDECATSP---CRNGGECVDMVGKFNCICPLGYSGSLCEEAKENCTPSPCL 695
            |::    |:.|| |:|||| .|   |..|..|::..|.|.|:.|      .|.|...|.:.....
  Rat   258 GYRILADGKSCE-DVDECA-GPQHMCPRGTTCINTGGGFQCVNP------ECPEGSGNISYVKTS 314

  Fly   696 EGHCLNTPEGYYCHCPPDRAGKHCEQLRPLCSQPPCNEGCFANVSLATSATTTTTTTTTATTTRK 760
            ...|...|      ||.|  .:.|..|....|        |..:||.::..|..|....||    
  Rat   315 PFQCERNP------CPMD--SRPCRHLPKTIS--------FHYLSLPSNLKTPITLFRMAT---- 359

  Fly   761 MAKPSGLPCSGHGSCEMSDVGTFCKCHVGHTGTFCEHNLNECSPNPCRNGGICLDGDGDFTCECM 825
                :.:|                    ||.|           ||..|.|.:..:..|.|..:..
  Rat   360 ----ASVP--------------------GHPG-----------PNSLRFGIVGGNSRGHFVMQRS 389

  Fly   826 SGWTGK 831
            ...||:
  Rat   390 DRQTGE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966
DSL 220..282 CDD:279722
EGF_CA 350..388 CDD:238011
EGF_CA 490..526 CDD:238011 14/35 (40%)
EGF_CA 610..645 CDD:238011 12/46 (26%)
EGF_CA 647..683 CDD:238011 13/38 (34%)
EGF_CA 798..833 CDD:238011 8/34 (24%)
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
Fbln7XP_215832.6 CCP 81..135 CDD:153056 14/54 (26%)
EGF_CA 136..172 CDD:238011 14/35 (40%)
vWFA <220..267 CDD:412136 12/48 (25%)
cEGF 250..273 CDD:403760 10/23 (43%)
EGF_CA 270..307 CDD:311536 15/43 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11395
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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