DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and arg-1

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_001024615.1 Gene:arg-1 / 180501 WormBaseID:WBGene00000185 Length:357 Species:Caenorhabditis elegans


Alignment Length:362 Identity:77/362 - (21%)
Similarity:121/362 - (33%) Gaps:105/362 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SACNLIALILILLVHKISAAGNFELEILEISNTNSHLLN-----GYCCGMPAELRATKTI-GCSP 122
            |..:....|.:..:...:|:|..|   |.||:..|.|:.     .:.|.:..||...:.: |..|
 Worm     2 SGFSFFITIFLCSIADTNASGIIE---LLISSPQSVLIKSTACASFKCPVHDELSVPRNVEGGVP 63

  Fly   123 CTTAFRLCLKEYQTTEQGASISTGCSFGNATTKILGGSSFVLSDPGVGAIV------LPFTFRWT 181
                .|:.:.:|:              |.|...|  ...|.:.:|....::      .|...:| 
 Worm    64 ----LRIHIGQYR--------------GEARQNI--DLHFEILEPSTNEMLALEQHRAPSDTKW- 107

  Fly   182 KSFTLILQALDMYNTSYPDAERLIEETSYSGVILPSPEWKTLDHIGRNARITYRVRVQCAVTYYN 246
                         ||..|    ::.||:                :|.|  :|..:|..|...||.
 Worm   108 -------------NTGLP----IVIETT----------------LGFN--VTVHLRNVCTSNYYG 137

  Fly   247 TTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCEEAICKAGCDPVHGKCDRPGECECRPGWR 311
            ..|..:|.|....  |:.|.:.|.:.|..||.|.:|...|                         
 Worm   138 KRCNRYCIPSPAL--HWECSTNGVRQCAVGWYGDDCSSNI------------------------- 175

  Fly   312 GPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQDLN--FCGTHEPCKHGGTCENTAPDKY 374
                ..|.....|.:|....:.:||.|.:.:.|..|:..::  .|.....|||||||.:......
 Worm   176 ----KFCSHQNPCANGGVCSTDYKCQCPSEFLGPRCETPVSKVHCTLERVCKHGGTCVSVNRTNV 236

  Fly   375 RCTCAEGLSGEQCEIVEH-PCATRPCRNGGTCTLKTS 410
            :|.|..|..|..|||..| .|:...|....||.::.|
 Worm   237 QCKCIRGFLGSLCEIGIHGNCSAMRCSVDETCQIRAS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 17/83 (20%)
DSL 220..282 CDD:279722 17/61 (28%)
EGF_CA 350..388 CDD:238011 12/39 (31%)
EGF_CA 490..526 CDD:238011
EGF_CA 610..645 CDD:238011
EGF_CA 647..683 CDD:238011
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
arg-1NP_001024615.1 DSL 107..171 CDD:128366 23/101 (23%)
EGF_CA 174..208 CDD:238011 8/62 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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