DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and Dll3

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_031892.2 Gene:Dll3 / 13389 MGIID:1096877 Length:585 Species:Mus musculus


Alignment Length:652 Identity:162/652 - (24%)
Similarity:214/652 - (32%) Gaps:236/652 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LILILLVHKISAAGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCS---PCTTAFRLCLK 132
            |||..|:.:...||.|||:|....              |.....|....|:   ||...||:|||
Mouse    13 LILAFLLPQALPAGVFELQIHSFG--------------PGPGLGTPRSPCNARGPCRLFFRVCLK 63

  Fly   133 ---EYQTTEQ----GASISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFTFRWTKSFTLILQA 190
               ..:.||.    ||::||...   ..|:..|.|:..|..|. |.:.:||...|..:|:|:::.
Mouse    64 PGVSQEATESLCALGAALSTSVP---VYTEHPGESAAALPLPD-GLVRVPFRDAWPGTFSLVIET 124

  Fly   191 LDMYNTSYPDAERLIEETSYSGVILPSPEWKTLDH-IGRN--------AR---------ITYRVR 237
            .         .|:|.|...       .|.|..|.. :||.        ||         :.:..|
Mouse   125 W---------REQLGEHAG-------GPAWNLLARVVGRRRLAAGGPWARDVQRTGTWELHFSYR 173

  Fly   238 VQCAVTYYNTTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCE-EAICKAGCDPVHGKCDRP 301
            .:|........|...||.|.   ....|| .|.:.|.....  .|| .::|:.||.|.||.|:.|
Mouse   174 ARCEPPAVGAACARLCRSRS---APSRCG-PGLRPCTPFPD--ECEAPSVCRPGCSPEHGYCEEP 232

  Fly   302 GECECRPGWRGPLCNECMVYPGCKHGSCNGSA-WKCV------CDTNWGGILCDQDLNFCGTHEP 359
            .||.|..||.||||...:....|.:....|.| ..|:      ||.|                 |
Mouse   233 DECRCLEGWTGPLCTVPVSTSSCLNSRVPGPASTGCLLPGPGPCDGN-----------------P 280

  Fly   360 CKHGGTCENTAPDKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGR 424
            |.:||:|..|: ..:.|.|..|..|.:||:....||..||.|||.|.                  
Mouse   281 CANGGSCSETS-GSFECACPRGFYGLRCEVSGVTCADGPCFNGGLCV------------------ 326

  Fly   425 SNMGRPVRRSSSMRSLDHLRPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEI 489
                                       |...|...              :.|.|..|:.|..||.
Mouse   327 ---------------------------GGEDPDSA--------------YVCHCPPGFQGSNCEK 350

  Fly   490 NIDECAGGPCEHGGTCIDLIGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAII 554
            .:|.|:..||::||.|:||....||.                                       
Mouse   351 RVDRCSLQPCQNGGLCLDLGHALRCR--------------------------------------- 376

  Fly   555 GSNLSSTALLAALTSAVASTSLAIGPCINAKECRNQPGSFACICKEGWGGVTCAENLDDCVGQ-C 618
                                                       |:.|:.|..|..:||||.|: |
Mouse   377 -------------------------------------------CRAGFAGPRCEHDLDDCAGRAC 398

  Fly   619 RNGATCIDLVNDYRCACASGFKGRDCETDIDECATSPCRNGGECVDMVGKFNCICPLGYSGSLCE 683
            .||.||::.....||:||.||.||||....|.||:.||.:||.|........|.|..||.|..||
Mouse   399 ANGGTCVEGGGSRRCSCALGFGGRDCRERADPCASRPCAHGGRCYAHFSGLVCACAPGYMGVRCE 463

  Fly   684 EA 685
            .|
Mouse   464 FA 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 24/87 (28%)
DSL 220..282 CDD:279722 16/79 (20%)
EGF_CA 350..388 CDD:238011 10/37 (27%)
EGF_CA 490..526 CDD:238011 11/35 (31%)
EGF_CA 610..645 CDD:238011 19/35 (54%)
EGF_CA 647..683 CDD:238011 13/35 (37%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
Dll3NP_031892.2 MNNL 25..85 CDD:284966 22/73 (30%)
DSL 156..246 CDD:302925 29/95 (31%)
EGF_CA 277..308 CDD:238011 12/48 (25%)
EGF_CA 314..349 CDD:238011 14/93 (15%)
EGF_CA 352..387 CDD:238011 14/116 (12%)
EGF_CA 389..424 CDD:238011 18/34 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..567
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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