DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and Ltbp4

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:NP_783572.2 Gene:Ltbp4 / 108075 MGIID:1321395 Length:1666 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966
DSL 220..282 CDD:279722
EGF_CA 350..388 CDD:238011
EGF_CA 490..526 CDD:238011
EGF_CA 610..645 CDD:238011
EGF_CA 647..683 CDD:238011
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
Ltbp4NP_783572.2 EGF_CA 356..>386 CDD:214542
TB 417..452 CDD:279073
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..590
cEGF 610..633 CDD:289433
EGF_CA 630..666 CDD:214542
EGF_CA 672..713 CDD:214542
EGF_CA 714..751 CDD:238011
EGF_CA 753..787 CDD:238011
EGF_CA 795..836 CDD:214542
EGF_CA 877..909 CDD:238011
EGF_CA 920..956 CDD:214542
EGF_CA 962..997 CDD:214542
EGF_CA 1003..1041 CDD:214542
EGF_CA 1091..1132 CDD:214542
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1221
TB 1235..1272 CDD:279073
EGF_CA 1338..>1367 CDD:238011
TB 1403..1439 CDD:279073
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1488..1566
EGF_CA 1616..>1650 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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