DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and LOC100535882

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:XP_003200521.2 Gene:LOC100535882 / 100535882 -ID:- Length:783 Species:Danio rerio


Alignment Length:688 Identity:257/688 - (37%)
Similarity:336/688 - (48%) Gaps:133/688 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RSLKSACNLIALILILLVHK---ISAAGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGCS 121
            |.:|...:...:.|..|..:   :.|.|.||::|.:..|....|.:|.||. |......:.....
Zfish    67 RDVKRGLHWTVICLFSLALRPQVVCAVGTFEVQIRQWQNPQGILQSGQCCD-PQSSGGQRCSSGD 130

  Fly   122 PCTTAFRLCLKEYQTTEQGASIS-TG-CSFGNATTKILGGSSFVL-------SDPGVGAIVLPFT 177
            .|.|.|:.||||||     |.:: || |::|..:|.:|||:|..|       ||...|.||:||.
Zfish   131 QCETFFKACLKEYQ-----ARVAPTGTCTYGTGSTPVLGGNSHSLHHHGNEGSDSRNGRIVIPFK 190

  Fly   178 FRWTKSFTLILQALDMYN-TSYPDAERLIEETSYSGVILPSPEWKTLDHIGRNARITYRVRVQCA 241
            :.|||||:|:::|||..| ||....|.|||....|.::.|..:|::..|.||...:.||:|.:|.
Zfish   191 YAWTKSFSLVIEALDHDNETSEAGREELIERVLLSSMLNPGEQWQSFRHHGRTFTLEYRLRFRCD 255

  Fly   242 VTYYNTTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCEEAICKAGCDPVHGKCDRPGECEC 306
            ..||...|...||.|||.|||:.|.:.|.|:|..||.|..|.:|:||.||...||.||.||||:|
Zfish   256 ANYYGPLCNKLCRARDDFFGHFDCDASGIKVCKEGWTGAECRQAVCKQGCHLDHGSCDLPGECKC 320

  Fly   307 RPGWRGPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQDLNFCGTHEPCKHGGTCENTAP 371
            ..||:|.||:||..:|||.||:|. ..|||||||||||:|||:|||:||.|:|||:||||.||.|
Zfish   321 HYGWKGDLCDECETFPGCDHGTCT-EPWKCVCDTNWGGLLCDKDLNYCGNHQPCKNGGTCTNTEP 384

  Fly   372 DKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGRSNMGRPVRRSSS 436
            ::|.|.|.||..|..|:|||:.|.:.||.|||||...                            
Zfish   385 NEYLCVCQEGFRGRNCDIVENACLSAPCENGGTCVED---------------------------- 421

  Fly   437 MRSLDHLRPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEINIDECAGGPCEH 501
                    |.|                          |:|.|:.|||||:|...:.:|...||..
Zfish   422 --------PSG--------------------------FSCRCSPGWTGPSCASAVQQCDSSPCGR 452

  Fly   502 GGTCIDLIGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALLAA 566
            |.||.:...||:|.|||.|.|..||:|.||||.                                
Zfish   453 GATCQETPEGFQCLCPPFWTGRTCQLDTNECET-------------------------------- 485

  Fly   567 LTSAVASTSLAIGPCINAKECRNQPGSFACICKEGWGGVTCAENLDDCVGQCRNGATCIDLVNDY 631
                        |.|:||:.|||..|.:.|.|..||.|..|......|.|.|.||..|    .|.
Zfish   486 ------------GVCVNARSCRNLIGGYLCDCLPGWSGPNCDIWNSSCRGLCLNGGHC----KDS 534

  Fly   632 RCACASGFKGRDCETDIDECATSPCRNGGECVDMVGKFN--CICPLGYSGSLCEEAKENCTPSPC 694
            :|.|..||.|:.|:..::.|.::.|.|||:||:..|...  |.|||||:|:.||...:.|.|:||
Zfish   535 QCVCLPGFSGKLCQIAVNACDSNTCVNGGQCVERQGGTGLLCRCPLGYTGTHCETELDLCNPNPC 599

  Fly   695 -LEGHCLNTPEGYYCHCPPDRAGKHCEQLRPLCSQPPC 731
             .|..||:|..||.|.||....|..|..|:..|.:|.|
Zfish   600 PKEMPCLSTGGGYKCVCPEGYFGNECLNLKDPCHEPHC 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 28/79 (35%)
DSL 220..282 CDD:279722 26/61 (43%)
EGF_CA 350..388 CDD:238011 22/37 (59%)
EGF_CA 490..526 CDD:238011 14/35 (40%)
EGF_CA 610..645 CDD:238011 12/34 (35%)
EGF_CA 647..683 CDD:238011 15/37 (41%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
LOC100535882XP_003200521.2 MNNL 93..167 CDD:284966 28/79 (35%)
DSL 234..296 CDD:279722 26/61 (43%)
EGF_CA 363..400 CDD:238011 22/36 (61%)
EGF_CA 405..438 CDD:238011 18/94 (19%)
EGF_CA 446..477 CDD:238011 13/30 (43%)
EGF_CA 479..514 CDD:238011 18/78 (23%)
EGF_CA 551..588 CDD:238011 15/36 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9676
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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