DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and jag2

DIOPT Version :9

Sequence 1:NP_001287558.1 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:XP_012824896.2 Gene:jag2 / 100497180 XenbaseID:XB-GENE-485160 Length:1224 Species:Xenopus tropicalis


Alignment Length:1316 Identity:460/1316 - (34%)
Similarity:635/1316 - (48%) Gaps:278/1316 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LKSAC---NLIALILILLVHKIS-AAGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGC-- 120
            :.|:|   :::||:|:.|..::| :.|.|||:::.:.|.|..||||.||.   ::::.:.:.|  
 Frog     4 ISSSCGHLSVLALVLLTLWVQVSHSTGYFELQLISLKNANGELLNGECCD---DIKSAQNLDCGR 65

  Fly   121 SPCTTAFRLCLKEYQTTEQGASIS-TG-CSFGNATTKILGGSSFVL--------SDPG-VGAIVL 174
            ..|.|..::||||:|     |.|: || |::|:..|.:|||::..|        |:|. .|.|.:
 Frog    66 DECDTYLKVCLKEFQ-----AKITPTGPCNYGSGFTSVLGGNTIYLNKYNHQGKSNPSESGRITI 125

  Fly   175 PFTFRWTKSFTLILQALDMYNTSYPDAERLIEETSYSGVILPSPEWKTLDHIGRNARITYRVRVQ 239
            ||.|.||:||||||:|.|..|.:..|.:.||:..:|:||..|..:|..|...|..|:...::||:
 Frog   126 PFQFAWTRSFTLILEAWDWDNDTKVDEDLLIDRVTYAGVTSPEDQWTLLPLTGHVAQFDVKIRVK 190

  Fly   240 CAVTYYNTTCTTFCRPRDDQFGHYACGSEGQKLCLNGWQGVNCEEAICKAGCDPVHGKCDRPGEC 304
            |...||.:.|..|||||:|..|||.|.|.|:|.|:.||.|..|::||||.|||.:||.|..||||
 Frog   191 CDENYYGSMCNKFCRPRNDFVGHYTCDSNGKKACMEGWMGAECKQAICKQGCDLLHGGCTVPGEC 255

  Fly   305 ECRPGWRGPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQDLNFCGTHEPCKHGGTCENT 369
            :|..||:|..|:||:.||||.||||. ..|.|.|:|||||:||::|||:||||.||.:||||.||
 Frog   256 KCHYGWQGLYCSECVPYPGCVHGSCQ-EPWDCKCETNWGGLLCNKDLNYCGTHHPCLNGGTCMNT 319

  Fly   370 APDKYRCTCAEGLSGEQCEIVEHPCATRPCRNGGTCTLKTSNRTQAQVYRTSHGRSNMGRPVRRS 434
            .||||.|.|.:|.||:.|||.||.||:.||.|.|.|                             
 Frog   320 EPDKYYCACPDGYSGQNCEIAEHACASNPCANDGVC----------------------------- 355

  Fly   435 SSMRSLDHLRPEGQALNGSSSPGLVSLGSLQLQQQLAPDFTCDCAAGWTGPTCEINIDECAGGPC 499
                                             .:::..|.|.|..||||.||.::|||||..||
 Frog   356 ---------------------------------HEVSSGFECHCPPGWTGTTCAVDIDECASNPC 387

  Fly   500 EHGGTCIDLIGGFRCECPPEWHGDVCQVDVNECEAPHSAGIAANALLTTTATAIIGSNLSSTALL 564
            ..||.|.|||.||.|.|||:|.|..||:|.||||..                             
 Frog   388 ASGGECKDLINGFECICPPQWAGTTCQLDANECEGK----------------------------- 423

  Fly   565 AALTSAVASTSLAIGPCINAKECRNQPGSFACICKEGWGGVTC-AENLDDCVGQCRNGATCIDLV 628
                           ||:||..|||..|.:.|.|..||.|:.| .:..|||.|||:||..|.|.|
 Frog   424 ---------------PCLNAYACRNLIGRYFCHCLPGWTGLNCHIKKSDDCHGQCQNGGICKDKV 473

  Fly   629 NDYRCACASGFKGRDCETDIDECATSPCRNGGECVDMVGKFNCICPLGYSGSLCEEAKENCTPSP 693
            |.|||.|..||.|::||.::::||:.||:|||.|.|.|..|.|.|..||||:|||...:.|.|:|
 Frog   474 NGYRCICPRGFVGKNCEIELNKCASKPCQNGGTCEDHVNTFRCHCAPGYSGTLCELTVDLCEPNP 538

  Fly   694 CL-EGHCLNTPEGYYCHCPPDRAGKHCEQLRPLCSQPPCN--EGCFANVSLATSATTT----TTT 751
            |. :..|.|....|||.|..|..||:|..|:..|....|.  :.|  .::::|:||..    .::
 Frog   539 CQNKARCYNLDGDYYCACSDDYDGKNCTHLKDHCKNSSCKIIDSC--TIAISTNATQEGIRYISS 601

  Fly   752 TTTATTTRKMAKPS------------------------GLPCSGHGSCEMSDVGTF-CKCHVGHT 791
            .......|.:::|.                        |.||...|:| ..::.:| |.|..|..
 Frog   602 NVCGPHGRCISQPGGNFTCSCDRGFTGAYCHENINDCLGTPCKNGGTC-TDEIDSFKCFCPNGWG 665

  Fly   792 GTFCEHNLNECSPNPCRNGGICLDGDGDFTCECMSGWTGKRCSERATGCYAGQCQNGGTCMPG-- 854
            |.||:.|.|:||||||:|.|.|:|...||.|||.:||.||.|..|...|.|..|.|||||...  
 Frog   666 GEFCDINYNDCSPNPCQNDGRCIDLVNDFACECKNGWKGKTCHSREYQCDANTCSNGGTCYDTGD 730

  Fly   855 -----------------APDKALQPH----------------CRCAPGWTGLFCAEAIDQCRGQP 886
                             |.:.:..|:                |.|..||.|..|.|..:.|...|
 Frog   731 SFHCLCCSGWEGSTCNLAKNSSCLPNPCENGGTCVGNGDSFSCMCKEGWEGRTCTENTNDCNPYP 795

  Fly   887 CHNGGTCESGAGWFRCVCAQGFSGPDCRINVNECSPQPCQGGATCIDGIGGYSCICPPGRHGLRC 951
            |:|||.|..|..||||.||.||:|||||||::||...||..||||||.|.||.|.||.||.||||
 Frog   796 CYNGGICVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAYGATCIDEINGYRCTCPSGRAGLRC 860

  Fly   952 EILLSDPKSACQNASNTISPYTALNRSQNWLDIALTGRTEDDENCNACVCENGTSRCTNLWCGLP 1016
            :.::...:|.......  .|:     ...|:           |.||:|.|.:|...||..|||..
 Frog   861 QEVIGLGRSCWLKGMQ--YPH-----GGKWV-----------EECNSCYCLDGGVECTKTWCGPK 907

  Fly  1017 NCYKVDPLSKSSNLSGVCKQHEVCVPALSE-TCLSSPCNVRGDCRALEPSRRVAPPRLPAKSSCW 1080
            .|     |.:.|.....|.:.:.|...::. .|...||...|:|.|          .|||...|.
 Frog   908 PC-----LLEHSKDKSRCPRGQDCEARVTPFKCFQPPCREWGECSA----------PLPAAVKCL 957

  Fly  1081 PNQAVVNENCARLTILLALERVGKGASVEGLCSLVRVLLAAQLIKKPASTFGQDPGMLMVLCDLK 1145
            |:...::.||||:|::...::|.:|.:||.:||.:|.|.:.:.:.|..        .|:||||:.
 Frog   958 PDSDYLDSNCARITLIFNSDKVPQGTTVENVCSEIRYLPSLRTVSKER--------QLVVLCDVS 1014

  Fly  1146 TGTNDTVELTVS-SSKLNDPQLPVAVGLLGELLSFRQLNGIQRRKELELQHAKLAALTSIVEVKL 1209
            :.....:|:.:| .|:.:|....:.......:     :|.|.:|:       ....:.::.|||:
 Frog  1015 SSMEKAIEVAISFISQTDDKDNSLIQNAANTI-----VNAITKRQ-------NSTVMLAVTEVKV 1067

  Fly  1210 ETARVADGSGHS-LLIGVLCGVFIVLVGFSVFISLYWKQRLAYRTSSGMNLTPSLDALRHEEEKS 1273
            ||..|  ||.|| .||.|||.||.::....:.|.::|.::                 .|.|.|:.
 Frog  1068 ETMVV--GSSHSDYLIPVLCTVFSIVWITCIIICVWWMRK-----------------RRKERERR 1113

  Fly  1274 NNLQNEENLRRYTNPL 1289
            ...::..|.|...||:
 Frog  1114 CQEESANNQRELLNPI 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_001287558.1 MNNL 83..161 CDD:284966 30/81 (37%)
DSL 220..282 CDD:279722 27/61 (44%)
EGF_CA 350..388 CDD:238011 24/37 (65%)
EGF_CA 490..526 CDD:238011 21/35 (60%)
EGF_CA 610..645 CDD:238011 19/34 (56%)
EGF_CA 647..683 CDD:238011 18/35 (51%)
EGF_CA 798..833 CDD:238011 21/34 (62%)
EGF_CA 879..913 CDD:238011 18/33 (55%)
EGF_CA 916..952 CDD:238011 22/35 (63%)
VWC_out <993..1053 CDD:214565 17/60 (28%)
jag2XP_012824896.2 MNNL 29..103 CDD:400141 30/81 (37%)
DSL 171..233 CDD:396134 27/61 (44%)
EGF_CA 300..338 CDD:238011 24/37 (65%)
EGF 344..372 CDD:394967 12/89 (13%)
EGF_CA 378..414 CDD:238011 21/35 (60%)
EGF_CA 416..451 CDD:238011 18/78 (23%)
EGF_CA 457..490 CDD:238011 19/32 (59%)
EGF_CA 494..528 CDD:238011 18/33 (55%)
EGF_CA 531..566 CDD:238011 13/34 (38%)
EGF_CA 634..669 CDD:238011 10/35 (29%)
EGF_CA 674..707 CDD:238011 20/32 (63%)
EGF_CA 715..745 CDD:238011 7/29 (24%)
EGF_CA 755..785 CDD:238011 6/29 (21%)
EGF_CA 787..822 CDD:238011 18/34 (53%)
EGF_CA 825..861 CDD:238011 22/35 (63%)
VWC_out 870..940 CDD:214565 19/92 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6769
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 711 1.000 Inparanoid score I637
OMA 1 1.010 - - QHG45993
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 1 1.000 - - FOG0003067
OrthoInspector 1 1.000 - - otm47422
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2046
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.980

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