DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and tmprss2

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:419 Identity:111/419 - (26%)
Similarity:164/419 - (39%) Gaps:110/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLLLCILPQLVISQSSCVTPAQAAGQCIRYQECPFVQKILGIYGRNIPRKIHNQISEMQCRSTTN 73
            ||..|:..::..:...||:   .:..|....:||..:                  .|.||     
Zfish   130 GLFACLQGRMCEADKKCVS---VSLWCDGTVDCPSGE------------------DEAQC----- 168

  Fly    74 TRDFHLCCPN-EAPPQSNQESQRKVVRSEGGNLNRYDR--------------QGL---------- 113
               :.|..|| .....||..:..|.|.|:|.|.|...:              ||:          
Zfish   169 ---YRLYGPNFLLQKYSNVSANWKNVCSDGFNDNLAKQACAEIGYKDTYSGYQGILSPSLDFISA 230

  Fly   114 -QLLNSV----TNCGNKGNPKVSGGKT-ARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTA 172
             |...:|    |:||.....::.||.| ...|.:||...|.|.    ....||||:|:...||||
Zfish   231 CQSSTAVSLKCTDCGRSTGNRIVGGTTVTSKGVWPWQVSLHYS----GRHLCGGSIITPYWILTA 291

  Fly   173 AHCI--IDQP---EVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKIS 232
            |||:  ...|   .|.|..|.:.::.|...    ...||:.|..:          :||    ...
Zfish   292 AHCVHQFSNPGGWTVYAGYLTQSEMASASG----NSVNRIVIHDF----------NPN----TNE 338

  Fly   233 HDVAIIKLDRVVKEKSHIKPVCLPIDQKSQELDFDQSFFVAGW-----GGTEKETVATKLQQALI 292
            :|:|:::|:..:...::|:|||||  .|.......|..:|.||     ||:...|    ||:|.|
Zfish   339 NDIALMRLNTALTISTNIRPVCLP--NKGMSFTAQQDCYVTGWGALFSGGSSSAT----LQEAKI 397

  Fly   293 TRKSLNEC--RQYYNKGEVSDNHICATG-TGIKHTCQGDSGGPVFFKHRFKNTYRVVQY--GVVS 352
            .......|  |..|| |.::|..|||.. .|...:||||||||:.      ...|.:.:  |..|
Zfish   398 QLIDSTICNSRPVYN-GLITDTMICAGKLAGGVDSCQGDSGGPLV------TNVRSLWWLLGDTS 455

  Fly   353 FGGRLCGQNQPGVFASVIDMLPWITQNLQ 381
            :|.....:|:|||:.:|...|.||.|.::
Zfish   456 WGDGCAVRNKPGVYGNVTYFLDWIYQQMR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 9/56 (16%)
Tryp_SPc 132..379 CDD:238113 81/262 (31%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060 7/56 (13%)
SRCR_2 173..248 CDD:470597 17/74 (23%)
Tryp_SPc 252..482 CDD:238113 81/264 (31%)
Blue background indicates that the domain is not in the aligned region.

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