DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and CG11313

DIOPT Version :9

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster


Alignment Length:413 Identity:127/413 - (30%)
Similarity:189/413 - (45%) Gaps:79/413 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VSAAIRLGLLLCILPQLVISQS-----SCVTPAQAAGQCIRYQECPFVQKILGIYGRNIPRKIHN 61
            |.||:    |||:   |:|..:     ||..|.|..|.|:....|..:..:|   .::.|.....
  Fly     3 VIAAV----LLCL---LIIRTAHGQYVSCRNPNQRTGYCVNIPLCVPLNSVL---AKSNPTDSEM 57

  Fly    62 Q-ISEMQCRSTTNTRDFHLCC------------PNEAPPQSNQESQRKVVRSEGGNLNRYDRQGL 113
            : |.|.:|..:..:....:||            ||:....|.....|.:.   ||::        
  Fly    58 RFIRESRCLVSDQSDLPFVCCTPDTDYNTTRARPNDEVIHSTLLPDRSIC---GGDI-------- 111

  Fly   114 QLLNSVTNCGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFR--CGGSLISERHILTAAHCI 176
             ..|.:|    |||..|.       .:|.|:.||:|:.:|.:..|  |.||||:.|:::|||||:
  Fly   112 -AYNQIT----KGNETVL-------TEFAWMVLLEYRPHDGQQLRTYCAGSLINNRYVVTAAHCV 164

  Fly   177 I--------DQPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISH 233
            .        |....::||||||:..:..||     .|..|:|...:..:|:||:|.::......:
  Fly   165 SAATRARKGDVSFRVSVRLGEHNTSAVVDC-----LNGRCLPEPVQIAVEEIRIHESFGTRLFWN 224

  Fly   234 DVAIIKLDRVVKEKSHIKPVCLPIDQKSQELDFDQSFFVAGWGGT---EKETVATKLQQALITRK 295
            |:|:|:|.|.|.....|:|||||.....|.....|:|.|||||.|   |...|..||:   :|..
  Fly   225 DIALIRLAREVAYSPSIRPVCLPSTVGLQNWQSGQAFTVAGWGRTLTSESSPVKMKLR---VTYV 286

  Fly   296 SLNECRQYYNKGEV-SDNHICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCG 359
            ....||:.|....| .|:|:||.|.....:|.||||||:...|  :..:  |..|:||||.. ||
  Fly   287 EPGLCRRKYASIVVLGDSHLCAEGRSRGDSCDGDSGGPLMAFH--EGVW--VLGGIVSFGLN-CG 346

  Fly   360 QN-QPGVFASVIDMLPWITQNLQ 381
            .. .|.|:.:|:....|||||::
  Fly   347 SRFWPAVYTNVLSYETWITQNIR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 13/69 (19%)
Tryp_SPc 129..376 CDD:214473 89/261 (34%)
Tryp_SPc 132..379 CDD:238113 91/261 (35%)
CG11313NP_651821.3 CLIP 24..78 CDD:288855 11/56 (20%)
Tryp_SPc 116..367 CDD:238113 96/274 (35%)
Tryp_SPc 116..364 CDD:214473 93/271 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25778
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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