DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001025468.1 Gene:Tmprss11c / 435845 MGIID:3521861 Length:431 Species:Mus musculus


Alignment Length:276 Identity:82/276 - (29%)
Similarity:129/276 - (46%) Gaps:45/276 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LLNSVTNCG-----NKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAH 174
            |||  |.||     ::|: ||:||:.|..|::||.|.|:..    ...|||.:|||...::||||
Mouse   183 LLN--TCCGRRTIIHRGH-KVAGGQDAEEGEWPWQASLQQN----SVHRCGATLISNYWLITAAH 240

  Fly   175 CII--DQPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAI 237
            |.|  ..|:...|..|                 .:...|.....::.|.:|.||.:....:|:|:
Mouse   241 CFIRAANPKDWKVSFG-----------------FLLSKPQAPRAVKNIIIHENYSYPAHDNDIAV 288

  Fly   238 IKLDRVVKEKSHIKPVCLPIDQKSQELDFDQSFFVAGWGGTEKE----TVATKLQQALITRKSLN 298
            ::|...|..:|:|:..|||  :.:|:...:....|.|||..:.:    .:..|.:..:|..|:.|
Mouse   289 VRLSSPVLYESNIRRACLP--EATQKFPPNSDVVVTGWGTLKSDGDSPNILQKGKVKIIDNKTCN 351

  Fly   299 ECRQYYNKGEVSDNHICATG--TGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQN 361
            ..:.|  .|.::...:|| |  .|....||||||||:..:.. |..:.:.  |:||:|......|
Mouse   352 SGKAY--GGMITPGMMCA-GFLKGRVDACQGDSGGPLVSEDS-KGIWFLA--GIVSWGDECALPN 410

  Fly   362 QPGVFASVIDMLPWIT 377
            :|||:..|.....|||
Mouse   411 KPGVYTRVTYYRDWIT 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 73/254 (29%)
Tmprss11cNP_001025468.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 74/256 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.