DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and Jon99Cii

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster


Alignment Length:269 Identity:78/269 - (28%)
Similarity:111/269 - (41%) Gaps:61/269 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLE 193
            :::.|..|..|..|::..|.:..|.  .:.||||:|....:||||||                  
  Fly    35 RITNGYPAYEGKVPYIVGLLFSGNG--NWWCGGSIIGNTWVLTAAHC------------------ 79

  Fly   194 SEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVH---------------GKISHDVAIIKLDRV 243
                   ..|.:.|.|    .|| ..||..|.|.|               |.:.:|:::|:... 
  Fly    80 -------TNGASGVTI----NYG-ASIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIRTPH- 131

  Fly   244 VKEKSHIKPVCLPIDQKSQELDFDQSFFVA-GWGGT-EKETVATKLQQALITRKSLNECRQYYNK 306
            |...|.:..|.|| ....:..|:...:.|| ||||| :...:...||...:...|.::|.:.:: 
  Fly   132 VDFWSLVNKVELP-SYNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCSRTWS- 194

  Fly   307 GEVSDNHICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRL-CGQNQPGVFASVI 370
              :.||.||....|.|.||.||||||: ..|   :..|:|  ||.|||... |....|.||:.|.
  Fly   195 --LHDNMICINTDGGKSTCGGDSGGPL-VTH---DGNRLV--GVTSFGSAAGCQSGAPAVFSRVT 251

  Fly   371 DMLPWITQN 379
            ..|.||..|
  Fly   252 GYLDWIRDN 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 77/264 (29%)
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 77/266 (29%)
Blue background indicates that the domain is not in the aligned region.

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