DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and grass

DIOPT Version :9

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:397 Identity:124/397 - (31%)
Similarity:208/397 - (52%) Gaps:43/397 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSAAIRLGLLLCILPQLVISQS------SCVTPAQAAGQCIRYQECPFVQKIL---GIYGRNIP 56
            |:::::.:...:.|:..:.:..:      .|.||....|||:.:..|..:::.|   ...|:.:|
  Fly     2 MIASSLAVLYGIAIVSSMGVQSARADYADDCTTPDGDQGQCMPFSSCRTIEERLTEAQKAGQKVP 66

  Fly    57 RKIHNQISEMQCRSTTNTRDFHLCCPNEAPPQSNQESQRKVV---RSEGGNLNRYDRQGLQLLNS 118
            ....:.:.:..|......|  |.|||:     :|.:...||:   :.|     .:|         
  Fly    67 ADYASYLQKALCGEFNGVR--HFCCPS-----ANIQHNSKVMSLFKDE-----NFD--------- 110

  Fly   119 VTNCGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIID-QPEV 182
               |||..:.:||.|...:....||:|||:|:......|.|||::||||:|||||||:.. |.::
  Fly   111 ---CGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDL 172

  Fly   183 IAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEK 247
            ..:|||||.:.:||||.. .|..:.|.||....|||:..:|..|....|.||:|::||:|.|..:
  Fly   173 YEIRLGEHRISTEEDCRQ-QGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQ 236

  Fly   248 SHIKPVCLPI-DQKSQELDFDQSFFVAGWGGTEKETVATKLQQALITRKSLNECRQYYNKGEVSD 311
            .||||:|||| |:..::.:...::||.|||.||..:.:..|.||.:..:..:.|.|.|.:. |..
  Fly   237 KHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRA-VPL 300

  Fly   312 NHICATGTGIKHTCQGDSGGPVFFKHRFKNTY--RVVQYGVVSFGGRLCGQ-NQPGVFASVIDML 373
            :.:|..|..::.:|:||||||:....::...|  ::|::|:||.|...||| :.||::.:|.:.:
  Fly   301 SQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYV 365

  Fly   374 PWITQNL 380
            .|||..:
  Fly   366 QWITDTM 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 14/59 (24%)
Tryp_SPc 129..376 CDD:214473 95/251 (38%)
Tryp_SPc 132..379 CDD:238113 96/251 (38%)
grassNP_651543.1 CLIP 32..90 CDD:197829 14/59 (24%)
Tryp_SPc 121..371 CDD:238113 96/251 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449696
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BQ4K
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25778
OrthoDB 1 1.010 - - D33748at7147
OrthoFinder 1 1.000 - - FOG0014334
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24273
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.860

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