DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and CG17477

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:261 Identity:69/261 - (26%)
Similarity:109/261 - (41%) Gaps:46/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 VSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLES 194
            :.||:.|..||.|:...|:..:..   ..|||::||:|.|:||.||:...|   ..||       
  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGS---HLCGGAIISDRWIITAGHCVKGYP---TSRL------- 78

  Fly   195 EEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSHIKPVCL---P 256
                ....||.|.. .|...|..:.|.:|.||...|..:|:.::.|:..:...:..:.|.|   |
  Fly    79 ----QVATGTIRYA-EPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSP 138

  Fly   257 IDQKSQELDFDQSFFVAGWGGTEKETVATKLQQAL--ITRKSLNE--CRQY---YNKGEVSDNHI 314
            ..:.:.||.|      .|||   .::.|..|...|  :.::.||.  |...   |...|:...||
  Fly   139 FPRGASELVF------TGWG---SQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHI 194

  Fly   315 CATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQPGVFASVIDMLPWITQN 379
            ||........|.||||||:        .::....|:::|... |.|..|.:|.:::....|:.|.
  Fly   195 CAYRQANIGACHGDSGGPL--------VHQGTLVGILNFFVP-CAQGVPDIFMNIMYYRDWMRQT 250

  Fly   380 L 380
            :
  Fly   251 M 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 68/256 (27%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 68/258 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.