DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:275 Identity:79/275 - (28%)
Similarity:129/275 - (46%) Gaps:43/275 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LLNSVTNCGNK----GNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHC 175
            |||  |.||.:    |..||:||:.|..|::||.|.|:..    ...|||.:|||...::|||||
  Rat   183 LLN--TCCGRRTITPGGHKVAGGQDAEEGEWPWQASLQQN----NVHRCGATLISNSWLITAAHC 241

  Fly   176 II--DQPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAII 238
            .:  ..|:...|..|                 .:...|..:..::.|.:|.||.:...::|:|::
  Rat   242 FVRSANPKDWKVSFG-----------------FLLSKPQAQRAVKSIVIHENYSYPAHNNDIAVV 289

  Fly   239 KLDRVVKEKSHIKPVCLPIDQKSQELDFDQSFFVAGWGGTEKE----TVATKLQQALITRKSLNE 299
            :|...|..:::|:..|||  :.:|:...:....|.|||..:.:    .:..|.:..:|..|:.|.
  Rat   290 RLSSPVLYENNIRRACLP--EATQKFPPNSDVVVTGWGTLKSDGDSPNILQKGRVKIIDNKTCNS 352

  Fly   300 CRQYYNKGEVSDNHICATG--TGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQ 362
            .:.|  .|.::...:|| |  .|....||||||||:..:.. |..:.:.  |:||:|......|:
  Rat   353 GKAY--GGVITPGMLCA-GFLEGRVDACQGDSGGPLVSEDS-KGIWFLA--GIVSWGDECALPNK 411

  Fly   363 PGVFASVIDMLPWIT 377
            |||:..|.....||:
  Rat   412 PGVYTRVTHYRDWIS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 70/254 (28%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 71/256 (28%)
Blue background indicates that the domain is not in the aligned region.

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