DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and CG14088

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_649100.2 Gene:CG14088 / 40098 FlyBaseID:FBgn0036858 Length:289 Species:Drosophila melanogaster


Alignment Length:276 Identity:66/276 - (23%)
Similarity:111/276 - (40%) Gaps:63/276 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 QLLNSVTNCGNKG---NPKVSGGKTARPGDFPWVALLKYKINDPRPFRCG-----GSLISERHIL 170
            |.|.::  ||.:.   :|.:.|         ||.|:|.:         .|     |:||.||.||
  Fly    25 QFLGNI--CGERRDGLSPDIVG---------PWTAILHH---------FGRIVGVGTLIHERFIL 69

  Fly   171 TAAHCIIDQPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDV 235
            |..|| .|...||..||||:              .|:.....|::.:.....:.|:.....::::
  Fly    70 TDVHC-GDSIGVIRARLGEY--------------GRIGSELAEDHIVAAFFSNANFNPETQANNM 119

  Fly   236 AIIKLDRVVKEKSHIKPVCLPIDQKSQ----ELDFDQSFFVAGWGGTEKETVATKLQQALITRKS 296
            .::||.|.|..|.||.|||:.:|.:.|    |||:   |....|..::|..:   |:...:.|..
  Fly   120 GLMKLLRTVVYKEHIIPVCILMDSRMQTFADELDY---FNGTTWKNSDKSPM---LRSKTVIRMP 178

  Fly   297 LNECRQYYNKGEVSDNHICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQN 361
             ..|      |::.....|| |.....:|...||..:..:..:....|.|.:|:.:.....|..:
  Fly   179 -QAC------GKLDHGQFCA-GHKDLDSCDEPSGAALTREIDYIGPNRTVLFGIANSVEVKCSNS 235

  Fly   362 QPGVFASVIDMLPWIT 377
            :  .:..|:.:..||:
  Fly   236 R--TYTDVVQLHQWIS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 61/255 (24%)
CG14088NP_649100.2 Tryp_SPc 42..248 CDD:473915 59/254 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.