DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and CG18223

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_649077.1 Gene:CG18223 / 40068 FlyBaseID:FBgn0036832 Length:322 Species:Drosophila melanogaster


Alignment Length:256 Identity:63/256 - (24%)
Similarity:111/256 - (43%) Gaps:53/256 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 VALLKY--KINDPRPFR-------CGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLESEEDCH 199
            :.|.||  .|...||.:       |||.:||..:|||:|||.:|:.:::      |  .|.....
  Fly    55 LVLAKYVVSIRSRRPHKLFGDNHFCGGVIISRTYILTSAHCAMDKRKIV------H--RSRVLVV 111

  Fly   200 YLGGTNRVCIPPYEEYGIE-QIRVHPNYVHGKI----SHDVAIIKLDRVVKEKSHIKPVCLPIDQ 259
            ..|.|||:    ....|:. .:.|...:|..|.    ::::|::.|   .|:.....|:...|:.
  Fly   112 VAGTTNRL----KSRKGLSLNMEVKKIFVPDKFTVFNTNNIALMML---AKKLPLDNPLVGVINL 169

  Fly   260 KSQELDFDQSFFVAGWG----GTEKETVATKLQQALITRKSLNECRQYYNKGEVSDNHICA---T 317
            .:.:.:...::.|.|||    |....:....:...|:.| .:.|.:.:..|.|:    :||   .
  Fly   170 PTADPEPGLNYTVLGWGRIFKGGPLASDILHIDVELLPR-DICEKKVHIFKEEM----MCAGNLN 229

  Fly   318 GTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRL-CG-QNQPGVFASVIDMLPWI 376
            .|..::.|.||:|.|:.|..        ..:||||:  |: || :..|.::.:|...:.||
  Fly   230 NTMDENPCAGDTGSPLIFNE--------TVFGVVSY--RVGCGSKTLPSIYTNVYMHMDWI 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 63/256 (25%)
CG18223NP_649077.1 Tryp_SPc 60..280 CDD:214473 59/249 (24%)
Blue background indicates that the domain is not in the aligned region.

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