DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and CG18180

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_648341.1 Gene:CG18180 / 39125 FlyBaseID:FBgn0036024 Length:264 Species:Drosophila melanogaster


Alignment Length:269 Identity:73/269 - (27%)
Similarity:110/269 - (40%) Gaps:42/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LNSVTNCGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCG-GSLISERHILTAAHCII-D 178
            ||..|........::..|..|..|..|::..|..:.:.......| |::|:...|||||||:. |
  Fly    22 LNRTTLLSQGAEGRIVNGYPAPEGKAPYIVGLFIRTDGSNSGAVGAGTIIANDWILTAAHCLTGD 86

  Fly   179 QPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIR-----VHPNYVHGKISHDVAII 238
            ..|:                ||  |:|......|.    :.:|     .||:: ..:...|:.:|
  Fly    87 YVEI----------------HY--GSNWGWNGAYR----QTVRRDNFISHPDW-PSQGGRDIGLI 128

  Fly   239 KLDRVVKEKSHIKPVCLPIDQKSQELDFDQSFFVA-GWGGTEKETVATKLQQALITRKSLNECRQ 302
            :... |.....|..:.|| ....|...:..::.|| ||||.:...:|..||...:...|.:||.|
  Fly   129 RTPH-VDFNGLINKIPLP-SMNEQNDRYQDTWCVACGWGGMDNGNLADWLQCVDVQIISNSECEQ 191

  Fly   303 YYNKGEVSDNHICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQPGVFA 367
            .|  |.|:...:|......|..|.||||||: ..|   :..|:|  ||::|....| .:.|..:.
  Fly   192 AY--GSVASTDMCTRHADGKSVCGGDSGGPL-VTH---DNARLV--GVITFASVSC-HDGPSGYT 247

  Fly   368 SVIDMLPWI 376
            .|.|.|.||
  Fly   248 RVSDYLEWI 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 70/253 (28%)
CG18180NP_648341.1 Tryp_SPc 36..259 CDD:238113 70/255 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.