DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and Jon66Ci

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster


Alignment Length:252 Identity:73/252 - (28%)
Similarity:106/252 - (42%) Gaps:40/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLE 193
            :::.|..|..|..|:...|.:.    ..:.||||:||...:|||.|||  ..:.:.|..|.....
  Fly    36 RITNGYPAEEGKAPYTVGLGFS----GGWWCGGSIISNEWVLTAEHCI--GGDAVTVYFGATWRT 94

  Fly   194 SEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSH-IKPVCLPI 257
            :.:..|::|..|.:                   .||  |.|:|:|::..|  :..| :..|.|| 
  Fly    95 NAQFTHWVGSGNFI-------------------THG--SADIALIRIPHV--DFWHMVNKVELP- 135

  Fly   258 DQKSQELDFDQSFFVA-GWGGT-EKETVATKLQQALITRKSLNECRQYYNKGEVSDNHICATGTG 320
            ....:..|:::.:.|| ||||| :...:...||...:.....:||..||..|.|.||.||.....
  Fly   136 SYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECASYYGTGTVGDNIICVRVVD 200

  Fly   321 IKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSF-GGRLCGQNQPGVFASVIDMLPWI 376
            .|.||.||||||:......|      ..||.:: .|..|....|..|..|...|.||
  Fly   201 GKGTCGGDSGGPLVTHDGSK------LVGVTNWVSGAGCQAGHPAGFQRVTYHLDWI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 73/249 (29%)
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 71/250 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.