DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and Jon65Aiii

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_648013.1 Gene:Jon65Aiii / 38683 FlyBaseID:FBgn0035665 Length:274 Species:Drosophila melanogaster


Alignment Length:267 Identity:74/267 - (27%)
Similarity:104/267 - (38%) Gaps:30/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LNSVTNCGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQP 180
            |.:|||.    ..:::.||||..|.||:...|.: .:....:.||||:|....:||||||.....
  Fly    30 LPAVTNI----EGRITNGKTATSGQFPYQVGLSF-ASTSGSWWCGGSIIDNTWVLTAAHCTSGAS 89

  Fly   181 EVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVK 245
            .|..               |.|.|.|......:....:....|.:|....:.:|:::||.. .|.
  Fly    90 AVTI---------------YYGATVRTSAQLVQTVSADNFVQHASYNSIVLRNDISLIKTP-TVA 138

  Fly   246 EKSHIKPVCLPIDQKSQELDFDQSFFVAGWGGTEKE--TVATKLQQALITRKSLNECRQYYNKGE 308
            ..:.|..|.||....:......|....:|||.|...  :||..||..:....|:::|:..|....
  Fly   139 FTALINKVELPAIAGTYSTYTGQQAIASGWGKTSDSATSVANTLQYEVFEVVSVSQCQNTYGSLV 203

  Fly   309 VSDNHICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSF-GGRLCGQNQPGVFASVIDM 372
            .::|.||........||.||||||:......|      ..||.|| ....|....|..|..|...
  Fly   204 ATNNVICVATPNKVSTCNGDSGGPLVLVSDSK------LIGVTSFVSSAGCESGAPAGFTRVTSY 262

  Fly   373 LPWITQN 379
            |.||..|
  Fly   263 LDWIKTN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 69/249 (28%)
Jon65AiiiNP_648013.1 Tryp_SPc 39..266 CDD:214473 67/249 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.