DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and CG1299

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:400 Identity:121/400 - (30%)
Similarity:179/400 - (44%) Gaps:98/400 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CVTPAQAAGQCIRYQECPFVQKILGIYGRNIPRKIHNQISEMQCRSTTNT--------------R 75
            |..|....|.|:..:||.                  :.::|::.||...|              :
  Fly   164 CRGPDTKPGNCVEIKECA------------------SLLNELRSRSQDATFANFLRASNAVCQNK 210

  Fly    76 DFHLCCP------NEAP------PQSNQESQRKVVRSEGGNLNRYDRQGLQLLNSVTNCGNKGN- 127
            ...:|||      |..|      |::..|..|:                  |||....||:... 
  Fly   211 GTQVCCPTGQGITNTTPAPSQIVPKNTDEIPRR------------------LLNVEEGCGSTVGY 257

  Fly   128 -PKVSGGKTARPGDFPWVALLKYKINDP--RPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGE 189
             .|:.||:.:|.|.:||:|||.|  :||  .||:|||:||:.||:|||||||  :.::..|||||
  Fly   258 FKKIVGGEVSRKGAWPWIALLGY--DDPSGSPFKCGGTLITARHVLTAAHCI--RQDLQFVRLGE 318

  Fly   190 HDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSHIKPVC 254
            |||.::.:..::            :..|.:...||:|.......|:||:.|:|.|:..|.|.|:|
  Fly   319 HDLSTDTETGHV------------DINIARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPIC 371

  Fly   255 LP----IDQKSQELDFDQSFFVAGWG----GTEKETVATKLQQALITRK----SLNECRQYYNKG 307
            ||    :.|||.   .....||||||    |.|...|..:||..:...|    |..:.::|::..
  Fly   372 LPHTANLRQKSY---VGYMPFVAGWGKTMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSAD 433

  Fly   308 EVSDNHICA-TGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQPGVFASVID 371
            :.....:|| ..:|.|.|||||||||:.....::...|....||||:|......|.|||::|...
  Fly   434 QFDKAVLCAGVLSGGKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQY 498

  Fly   372 MLPWITQNLQ 381
            .:.||.|.:|
  Fly   499 FMDWIIQQVQ 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 11/70 (16%)
Tryp_SPc 132..379 CDD:238113 95/261 (36%)
CG1299NP_647862.1 CLIP 37..92 CDD:463440
CLIP 164..216 CDD:463440 10/69 (14%)
Tryp_SPc 261..503 CDD:238113 93/260 (36%)
Blue background indicates that the domain is not in the aligned region.

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