DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5909 and Jon25Biii

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:251 Identity:72/251 - (28%)
Similarity:98/251 - (39%) Gaps:39/251 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLE 193
            :::.|..|..|..|:...|.:.    ..:.||||:|:...:|||.|||.|...||.         
  Fly    36 RITNGYAAPEGKAPYTVGLGFS----GGWWCGGSIIAHDWVLTAEHCIGDAASVIV--------- 87

  Fly   194 SEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSH-IKPVCLPI 257
                  |.|.|.|.........|......|.|       .|:|:|::..|  :..| :..|.|| 
  Fly    88 ------YFGATWRTNAQFTHTVGNGNFIKHSN-------ADIALIRIPHV--DFWHMVNKVELP- 136

  Fly   258 DQKSQELDFDQSFFVA-GWGGT-EKETVATKLQQALITRKSLNECRQYYNKGEVSDNHICATGTG 320
            ....:..::::.:.|| ||||| :...:...||...:......||...|  |.|.||.||.....
  Fly   137 SYNDRYNNYNEWWAVACGWGGTYDGSPLPDWLQCVDLQIVHNEECGWTY--GSVGDNVICTRTVD 199

  Fly   321 IKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQPGVFASVIDMLPWI 376
            .|..|.||||||: ..|.......|..:  ||..|  |....|..|..|...|.||
  Fly   200 GKSICGGDSGGPL-VTHDGSKLVGVSNF--VSSNG--CQSGAPAGFQRVTYHLDWI 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 72/248 (29%)
Jon25BiiiNP_608881.1 Tryp_SPc 37..253 CDD:238113 72/250 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.