DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and Clipb4

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_061505120.1 Gene:Clipb4 / 3290783 VectorBaseID:AGAMI1_007833 Length:737 Species:Anopheles gambiae


Alignment Length:374 Identity:122/374 - (32%)
Similarity:182/374 - (48%) Gaps:62/374 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SCVTPAQAAGQCIRYQECPFVQKILGIYGRNIPRKIHNQ---ISEMQC----RSTTNTRDFHLCC 81
            :||||...:|:||.::||   |.::.||  |.|...|:.   :::.:|    |.|.      :||
Mosquito   408 NCVTPLGESGKCILFREC---QPLITIY--NKPINTHDDTLLLTQSRCGMLQRKTL------VCC 461

  Fly    82 PNEAPPQSNQESQRKVVRSEGGNLNRYDRQGLQLLNSVTNCGNKGNPKVSGGKTARPGDFPWVAL 146
            |..:..:|:                         |.....||.....:|.||:..:..:|||.||
Mosquito   462 PVTSQARSS-------------------------LPEPPVCGIHLADRVIGGQPTQIDEFPWTAL 501

  Fly   147 LKYKINDPR-PFRCGGSLISERHILTAAHCIIDQP---EVIAVRLGEHDLESEEDCHYLGGTNRV 207
            ::::..|.. .|.||||||::|:|:||||||...|   :|..|||||.||.|..||.     |..
Mosquito   502 IEFQKPDGSFGFHCGGSLINDRYIVTAAHCIKSIPRGWKVHRVRLGEWDLTSANDCQ-----NEF 561

  Fly   208 CIPPYEEYGIEQIRVHPNY--VHGKISHDVAIIKLDRVVKEKSHIKPVCLPIDQKSQELDF-DQS 269
            |.....:..||||.||..|  .....::|:|:|:..|.|.....::|:|||:....:..:. ...
Mosquito   562 CSDAPIDLDIEQIVVHTGYDTKDQSNANDIALIRFTRPVNYSQTVRPICLPLSSSLRNRNHAGMP 626

  Fly   270 FFVAGWGGTEKETVATKLQQALITRKSLNECRQYYNKGEV--SDNHICATGTGIKHTCQGDSGGP 332
            .:.||||.||..|.:.|..:..:..|||.||...|.:|.:  ...|:||.|...|.||.||||||
Mosquito   627 AYAAGWGKTESATASEKKLKVEMNIKSLQECAPVYQRGGILLKKTHMCAGGVRGKDTCSGDSGGP 691

  Fly   333 VFFKHRFKNTYRVVQYGVVSFGGRLCG-QNQPGVFASVIDMLPWITQNL 380
            :.  .:...::.::  ||||||.:.|| ...|||:.:|.:.:.||..|:
Mosquito   692 LM--RQMSGSWYLI--GVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDNI 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 19/63 (30%)
Tryp_SPc 132..379 CDD:238113 95/256 (37%)
Clipb4XP_061505120.1 None

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