DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and gd

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster


Alignment Length:425 Identity:95/425 - (22%)
Similarity:151/425 - (35%) Gaps:153/425 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IRYQECPFVQKILGIYGRNIPRKIHNQISEMQCRSTTNTRDFHLCCPNEA------PPQSN---- 90
            |::::.||.|         .|::|        |.......||||....|:      .|:|:    
  Fly   173 IQFKKKPFAQ---------APKEI--------CGRIDRDLDFHLSQRTESLHVAIGEPKSSDGIT 220

  Fly    91 ------------------QESQRKVVRSEGGNLNRYDRQGLQLLNSVTNCGNKGNPKVSGGKTAR 137
                              .||:.:.:.|:..:          .|.|:|.                
  Fly   221 SPVFVDDDEDDVLEHQFVDESEAEAIESDSAD----------SLPSITR---------------- 259

  Fly   138 PGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCI------IDQPEVIAVRLGEHDLESEE 196
             |.:||:|.:.........|:|||||:|.|.::::|||.      ....||: |.||.|:|::  
  Fly   260 -GSWPWLAAIYVNNLTSLDFQCGGSLVSARVVISSAHCFKLFNKRYTSNEVL-VFLGRHNLKN-- 320

  Fly   197 DCHYLGGTNRVCIPPYEEYG-----IEQIRVHPNYVHGKISH---DVAIIKLDRVVKEKSHIKPV 253
                           :.|.|     ::.|.:||:: :.::|.   |:|:|.|...|:..:.|:|.
  Fly   321 ---------------WNEEGSLAAPVDGIYIHPDF-NSQLSSYDADIAVIILKDEVRFNTFIRPA 369

  Fly   254 CLPIDQKSQELDFDQSFFVAGWG-GTEKETVATKLQQALITRKSLN---------------EC-R 301
            ||.......|....:...|.||. .....|...||...|..:||.:               || |
  Fly   370 CLWSGSSKTEYIVGERGIVIGWSFDRTNRTRDQKLSSELPGKKSTDASAPKVVKAPIVGNAECFR 434

  Fly   302 QYYNKGEVSDNH-ICA-----------TGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVS-- 352
            ...:...:|.|. .||           :|..| :|  |.||..:|.:...:...|    |.||  
  Fly   435 ANAHFRSLSSNRTFCAGIQAEERDTHQSGASI-YT--GISGAGLFIRRNNRWMLR----GTVSAA 492

  Fly   353 ----------FGGRLCGQNQPGVFASVIDMLPWIT 377
                      ...:||.:||..::|.|...|.|||
  Fly   493 LPAVETPDAESSHKLCCKNQYIIYADVAKFLDWIT 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829 11/45 (24%)
Tryp_SPc 132..379 CDD:238113 75/301 (25%)
gdNP_001259479.1 GD_N 27..124 CDD:464985
Tryp_SPc 257..526 CDD:238113 73/311 (23%)
Blue background indicates that the domain is not in the aligned region.

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