DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and CG30187

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001246475.2 Gene:CG30187 / 246509 FlyBaseID:FBgn0050187 Length:500 Species:Drosophila melanogaster


Alignment Length:268 Identity:77/268 - (28%)
Similarity:125/268 - (46%) Gaps:38/268 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 CGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVR 186
            ||.....|::||..|...:..|:|    .:::...|.|||:||.:|.:|||||||:|| :|.:|.
  Fly    28 CGINIALKITGGHNAAFQNSVWMA----AVHNRTHFICGGTLIHKRFVLTAAHCIVDQ-DVQSVS 87

  Fly   187 LGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNY-VHGKISHDVAIIKLDRVVKEKSHI 250
            ||.::...                |.:...:....||.:: |.....:|:.::||...|...:.|
  Fly    88 LGAYNKSD----------------PADRKDVITAVVHSSFDVRASYENDIGLLKLSSDVIFNALI 136

  Fly   251 KPVCLPIDQK-SQELDFDQSFFVAGWGGTEKETVATKLQQALITRKSLNECRQYYNKGEV--SDN 312
            :|:|:.:::. :..:...::|...|||.......:..||..::......||   |.:..|  |:.
  Fly   137 RPICIVLNKSMANHMRNMRTFKAFGWGTLRGNKTSDILQTIILNHLDREEC---YMELSVYPSEK 198

  Fly   313 HICATGTGIKHTCQGDSGGPV---FFKHRFKNTYRVVQYGVVSFGGRLC-GQNQPGVFASVIDML 373
            .||| |.....||.||||||:   .|.....|  |.||:|::|.|...| ||   ||:..::...
  Fly   199 QICA-GVPSGDTCGGDSGGPLTNDVFIQGIGN--REVQFGIISVGKTSCDGQ---GVYTDLMSFA 257

  Fly   374 PWITQNLQ 381
            .||...::
  Fly   258 DWIKMTIE 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 74/254 (29%)
CG30187NP_001246475.2 Tryp_SPc 35..260 CDD:214473 73/254 (29%)
Trypsin 316..>384 CDD:459667
Blue background indicates that the domain is not in the aligned region.

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