DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5909 and Gzmb

DIOPT Version :10

Sequence 1:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:262 Identity:80/262 - (30%)
Similarity:120/262 - (45%) Gaps:44/262 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPEVIAVRLGEHDLE 193
            ::.||..|:|...|::|.|:.........:|||.||.|..:||||||   ....|.|.||.|:::
  Rat    20 EIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC---SGSKINVTLGAHNIK 81

  Fly   194 SEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSHIKPVCLPID 258
            .:|....:       ||      :.:|..||.|....||:|:.::||....|..|.:||:.||  
  Rat    82 EQEKMQQI-------IP------VVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLP-- 131

  Fly   259 QKSQELDFDQSFFVAGWG-----GTEKETVATKLQQALITRKSLNECRQYYNKGEVSDNHICATG 318
            :::.::......:|||||     |...:|    ||:..:|.:...:|..|........|.|||..
  Rat   132 RRNVKVKPGDVCYVAGWGKLGPMGKYSDT----LQEVELTVQEDQKCESYLKNYFDKANEICAGD 192

  Fly   319 TGIKH-TCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQNQ---PGVFASVIDMLPWITQN 379
            ..||. :.:||||||:..|.        |..|:||:     |||.   |..|..|...|.||.:.
  Rat   193 PKIKRASFRGDSGGPLVCKK--------VAAGIVSY-----GQNDGSTPRAFTKVSTFLSWIKKT 244

  Fly   380 LQ 381
            ::
  Rat   245 MK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 80/255 (31%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 80/257 (31%)
Blue background indicates that the domain is not in the aligned region.

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