DRSC/TRiP Functional Genomics Resources

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Protein Alignment grass and CG34436

DIOPT Version :9

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001097954.1 Gene:CG34436 / 5740743 FlyBaseID:FBgn0085465 Length:270 Species:Drosophila melanogaster


Alignment Length:289 Identity:79/289 - (27%)
Similarity:123/289 - (42%) Gaps:65/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DENFDCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQN 170
            |:|  |...  .|:||..   :.|||||||:..     ....|.||:|.:.:::|:|.||...:.
  Fly    24 DQN--CAEV--SRLSNDI---IFSRPWMALVLL-----PNKTCSGALIHKYFVITSASCVFNQER 76

  Fly   171 DLYEIRLG------EHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKL 229
            .:  :|||      ||.:|...|               :..::...||..|:..:..||||||:|
  Fly    77 AI--VRLGQLSIKQEHIVSYSSD---------------DYHVQSAYIHRFYEKSNFEHDIALLEL 124

  Fly   230 NRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTEN-----GSSSDVLLQANVPLQPRSA 289
            ...|.::.||:||||.: |:.....:....|....||..|.     ..:|.:...:.|      .
  Fly   125 QNDVLYKAHIRPICLWL-DKSDIDTQMFKRYETFRWGIDEKYILPAAKTSKIKHISQV------K 182

  Fly   290 CSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVV-TCGQIS 353
            |..|::.....|.:|.|..: :..|. ::|.||....:|..:.  :...|||.|.|.. ||    
  Fly   183 CENAFKLYPQNSHICAGYKN-KSKCV-ETGSPLFKKIRYYTKI--RYTLFGIQSYGESRTC---- 239

  Fly   354 LPGLYTNVGEYVQWI------TDTMASNG 376
               |||:|.:|:.||      .:.:.|||
  Fly   240 ---LYTDVTKYIDWIMGVIQNVNVIVSNG 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 71/267 (27%)
CG34436NP_001097954.1 Tryp_SPc 40..252 CDD:304450 69/251 (27%)
Tryp_SPc 40..251 CDD:214473 68/250 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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