DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grass and ea

DIOPT Version :9

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_524362.2 Gene:ea / 41858 FlyBaseID:FBgn0000533 Length:392 Species:Drosophila melanogaster


Alignment Length:408 Identity:138/408 - (33%)
Similarity:202/408 - (49%) Gaps:50/408 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMIASSLAVLYGIAIVSSMGV-----QSARADYADDCTTPDGDQGQCMPFSSCRTIEERLTEAQK 60
            |:..|.:.:..||...||.|.     ::|:......|.||:.::..|:....|:.:...||....
  Fly     1 MLKPSIICLFLGILAKSSAGQFYFPNEAAQVPNYGRCITPNRERALCIHLEDCKYLYGLLTTTPL 65

  Fly    61 AGQKVPADYASYLQKALCGEFNGVRHFCC--------------PSANIQHNSKVMSLFKDENFDC 111
            ....     ..||.::.||..||....||              |..|:..|| ::.|    ...|
  Fly    66 RDTD-----RLYLSRSQCGYTNGKVLICCPDRYRESSSETTPPPKPNVTSNS-LLPL----PGQC 120

  Fly   112 GNFLSQRVSNGYEVKLSSRPWMALLRY-QQFGESRFLCGGAMISERYILTAAHCVHG--LQND-- 171
            ||.||.|:..|.:.|:...|||||:.| :..|:....|||::||.||::||:|||:|  |..|  
  Fly   121 GNILSNRIYGGMKTKIDEFPWMALIEYTKSQGKKGHHCGGSLISTRYVITASHCVNGKALPTDWR 185

  Fly   172 LYEIRLGEHRISTEEDCRQQGR-KKKCAPPVVNVGIEKHLIHEKY--DARHIMHDIALLKLNRSV 233
            |..:||||...:|..||....| .|.||||.::|.:|:.:.|..|  .:::.::|||||:|.:.|
  Fly   186 LSGVRLGEWDTNTNPDCEVDVRGMKDCAPPHLDVPVERTIPHPDYIPASKNQVNDIALLRLAQQV 250

  Fly   234 PFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAV 298
            .:...::|||||:...|:.......|..|.|||.||..|:|::.|:|.|.......|...|....
  Fly   251 EYTDFVRPICLPLDVNLRSATFDGITMDVAGWGKTEQLSASNLKLKAAVEGFRMDECQNVYSSQD 315

  Fly   299 PL---SQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEF----GIVSQGVVTCGQISLPG 356
            .|   :|:|.||.:..|||:|||||||      :|....|:..:    |:||.|...||....||
  Fly   316 ILLEDTQMCAGGKEGVDSCRGDSGGPL------IGLDTNKVNTYYFLAGVVSFGPTPCGLAGWPG 374

  Fly   357 LYTNVGEYVQWITDTMAS 374
            :||.||:||.||.:|:.|
  Fly   375 VYTLVGKYVDWIQNTIES 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829 15/71 (21%)
Tryp_SPc 121..371 CDD:238113 102/264 (39%)
eaNP_524362.2 CLIP 37..89 CDD:288855 13/56 (23%)
Tryp_SPc 127..386 CDD:214473 101/264 (38%)
Tryp_SPc 128..389 CDD:238113 102/266 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5140
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D402896at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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